Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi647g00013 ATGTGTGTAATATGGCAGGGGGAACGAATTGAAGCCACCGTGCAACGTCCTCTGATGAACAAGTTTAGGAATGGTTTATTTGAGGGTCAAGTTTATAAGGTCACTCAGTTTGGGCTCATGCGAAATGAAGGGATGTTTCGAGCTGCGCCCCATGAGTTTAGGCTACTGTTTAATGCAACCACTAAGCTGATTCCCTGTCAGAATCCTAGGATTCGGTCGTTGGGCCTTGCTCTGATGAAGACTTCAGACATAGCGCAGACAAATGGGCGGTCTAATTTCTTGCTTGATTTTATGGGTGTCCTAACTGCTGTCTCCGAGGAGTTGCATCTGAATAAGGAGGGACGACAAACTCGAATGATGCTCCTAGATTTAGTTGACGAGATGGGAAAGGTTCGATGTGCTATATTTGGAGACTTGGTTGATGTGGTTTGTGGATTTTTACCTTCATCTATGCCTGGTCTACCTGTTGTTGTGATTCAGCTAGCAAGGGTGAACTTTTATAAGGGCCAAGTTGGCATCCAAAATGTGATGAATGCCACTAAGATTTCTTGGAATCCAGATTGGCCAGTTGCTGTTGAATTTAAGAATAGCCTTGTTGTACACGAGGTTGAAACAGATCTCTGTGTTGGGACTATATCAGATAGAGGCCGTGCA 654 0.445 MCVIWQGERIEATVQRPLMNKFRNGLFEGQVYKVTQFGLMRNEGMFRAAPHEFRLLFNATTKLIPCQNPRIRSLGLALMKTSDIAQTNGRSNFLLDFMGVLTAVSEELHLNKEGRQTRMMLLDLVDEMGKVRCAIFGDLVDVVCGFLPSSMPGLPVVVIQLARVNFYKGQVGIQNVMNATKISWNPDWPVAVEFKNSLVVHEVETDLCVGTISDRGRA 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi647g00013 218 SUPERFAMILY Nucleic acid-binding proteins 7 68 IPR012340 -
Sebi647g00013 218 Gene3D - 5 68 IPR012340 -
Sebi647g00013 218 Pfam Domain of unknown function DUF223 6 69 IPR003871 -
Sebi647g00013 218 CDD RPA1_DBD_A_like 6 62 - -
Sebi647g00013 218 SUPERFAMILY Nucleic acid-binding proteins 78 198 IPR012340 -
Sebi647g00013 218 Gene3D - 71 205 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi647g00013 Sebi-Chr647 318120 319147 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi647g00013 5 195 Core DNA Replication Machinery Family AT2G06510 26.263 3.55e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi647g00013 - K07466 lja:Lj6g3v0884310.1 187.193