Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi647g00006 ATGGAATATGAATCCTACAGTCGCTTCTCTATCCTTCCTCTTGAAGGATTCAGCCCACATTTTCTGTCACAAGAAGAAAGTCCTTTGTGGGTATGCGACTACTTCTATATTAATTTTCATTGTCACAGGCACACAAATCATTCCCCCCGCCAGACTCATTCAACCCACAATGAAATAGCAGCCCCAATAACTACATTTGATCAATCCTACTTGATTCCTCGTGATATCATCTCTGATTTCGGAGTCATAGATCCTATATTCTATTTGCGGGAACTCTTCCACTCTGTACCTGTTTCTTCAGAGTTAATGGACTCAATTCTACCTAGTCTTGTTGCACGTGCTAAGGGTATGATTGAACACAACAATGAAGGACGTCACATGTTGGCGATGACTGTGATTCTTTGCAGTACCACATGGCCGAGGCACAGTGCAGATGAAGAAGGTATTGATCACTTTATAGACGACCTTATGAAGTCGCTTGAATACAAATTTGACGACACTGATGATTCTTGTTCTGAATTGTGCGCAATTTGTTTGGAGGGGTTGGGCACTAGTGGATCTCAGTCAAAAGTTGTTCGCACCAAGTGCTTGCATATGTTCCATGAAAAGTGCATTTCTCAATGGCTTCTAAGCTGTAACACCAACAATCAATCTTGTTCATGCCCATTGTGTCGTTGCCAAATTGCTTCTTGA 693 0.4185 MEYESYSRFSILPLEGFSPHFLSQEESPLWVCDYFYINFHCHRHTNHSPRQTHSTHNEIAAPITTFDQSYLIPRDIISDFGVIDPIFYLRELFHSVPVSSELMDSILPSLVARAKGMIEHNNEGRHMLAMTVILCSTTWPRHSADEEGIDHFIDDLMKSLEYKFDDTDDSCSELCAICLEGLGTSGSQSKVVRTKCLHMFHEKCISQWLLSCNTNNQSCSCPLCRCQIAS 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi647g00006 230 CDD RING-H2 175 225 - -
Sebi647g00006 230 Pfam Ring finger domain 175 225 IPR001841 -
Sebi647g00006 230 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 69 226 - -
Sebi647g00006 230 SUPERFAMILY RING/U-box 162 228 - -
Sebi647g00006 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 137 229 IPR013083 -
Sebi647g00006 230 SMART ring_2 175 224 IPR001841 -
Sebi647g00006 230 ProSiteProfiles Zinc finger RING-type profile. 175 225 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi647g00006 Sebi-Chr647 140774 141466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi647g00006 172 228 C3H Transcription Factor Family AT4G12190 38.596 7.43e-07 43.9