Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi646g00033 ATGGAGGGTGAGAATCAGGTAAATGATGCAAAAAACAAGAAAGTATCTGATGAAGAAGCTTTCCTATTTGCCATGGAACTAGCAGGTGCCTCTGCTGTCCCTATGGTTCTCAAGTCAGCTTTGGAGCTTGGAGTCATTGAAACTATAGCAAAGGCTGGTCCTGGAGCATACCTTTCCCCTTCTCACATAGCTTCTCAGATTCCATCAATAAAGAATCCAGAAGCACCTGCTATGTTGGATCGCTTGTTGCGCTTATTGGCTAGCTACAACATCCTCACATATTCCCTCATCACTCATAGTCATGGAGATGCTGAAAGACACTATGGTCTTAGCCCTTATGCCAAATACTTTGTCAACAACCAAGATGGTTTCTCCATGATTTCTTCCTTTCTCATGCAACATGACAAAGTCCTCAAAGACATGTGGTATCATTTGACAGATTCAGTTGAGGAGGGTGGGCTTCCATTTAACAATGCTTATGGAATGACTGCCTTTGAATTTCATGGGACAAATCCAAGGTTCAACAAGCTTTTCAACAAGGGGATGTCAGATTGCTCAAGCATCATAATGAATAAAGTTCTTGAGACCTATAAAGGCTTTGAGGGTCTTGGATCTGTGGTTGATGTTGGTGGTGGGACTGGAACTATCATTAACATGATTGTCTCTAAGTATCCCTCCATAAAGGGGATTAATTTTGACTTGCCTCACGTCATTAAAGAAGCTCCTTCTTATCCAGGTGTGGAGCATGTTGGTGGAGACATGTTTGTCAGTATTCCAAAAGGTGATGCCATTTTCATGAAGTGGATATGTCATGACTGGAATGATGAGGAATGCTTGAAATTTTTGAAGAATTGCTATGACTCGGTGCCTGAGACAGGGAAGGTGATTTTGGTTGAAAGCAATATTCCAGCAGTTCCAGACTCTAAGTTGGCGTCAAGGTGTGTGTTTGAAATGGATGTTATAATGTTGTGTCATAGCTCAGGTGGAAGAGAGAGAACAGAGAAAGAGTATGAGGCATTGGCTAAGGGGGCTGGATTCCAAGGTTTCCGAGTAGCATGTTGTGCTTTCAACATGTATGTCATGGAGTTTCTTAAGAAGCCTTAG 1104 0.4221 MEGENQVNDAKNKKVSDEEAFLFAMELAGASAVPMVLKSALELGVIETIAKAGPGAYLSPSHIASQIPSIKNPEAPAMLDRLLRLLASYNILTYSLITHSHGDAERHYGLSPYAKYFVNNQDGFSMISSFLMQHDKVLKDMWYHLTDSVEEGGLPFNNAYGMTAFEFHGTNPRFNKLFNKGMSDCSSIIMNKVLETYKGFEGLGSVVDVGGGTGTIINMIVSKYPSIKGINFDLPHVIKEAPSYPGVEHVGGDMFVSIPKGDAIFMKWICHDWNDEECLKFLKNCYDSVPETGKVILVESNIPAVPDSKLASRCVFEMDVIMLCHSSGGRERTEKEYEALAKGAGFQGFRVACCAFNMYVMEFLKKP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi646g00033 367 CDD AdoMet_MTases 206 298 - -
Sebi646g00033 367 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 365 IPR016461 GO:0008168
Sebi646g00033 367 Gene3D - 3 117 IPR036388 -
Sebi646g00033 367 SUPERFAMILY "Winged helix" DNA-binding domain 16 120 IPR036390 -
Sebi646g00033 367 PIRSF O-mtase 1 365 IPR016461 GO:0008168
Sebi646g00033 367 Pfam Dimerisation domain 35 87 IPR012967 GO:0046983
Sebi646g00033 367 FunFam Caffeic acid O-methyltransferase 118 365 - -
Sebi646g00033 367 PANTHER O-METHYLTRANSFERASE 24 346 IPR016461 GO:0008168
Sebi646g00033 367 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 363 IPR029063 -
Sebi646g00033 367 Gene3D Vaccinia Virus protein VP39 118 365 IPR029063 -
Sebi646g00033 367 FunFam Caffeic acid 3-O-methyltransferase 2 117 - -
Sebi646g00033 367 Pfam O-methyltransferase domain 142 347 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi646g00033 Sebi-Chr646 365780 367893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi646g00033 14 366 Monolignol Biosynthesis Gene Families AT5G54160 63.173 1.71e-169 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi646g00033 K13066 - qsa:O6P43_020016 528.865