Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi646g00019 ATGAACATGGCGACCATTATTCCACAGAATGCCAACCTCTGTGTGAGTGACTCAGACCCTCTAAACTGGGATTCGGCAGCTAATTCACTCAAGGGTAGCCACTTTGATGAAGTAAAACGCATGGTGGCAGAGTACCGGAAGCCAGTGATCTGTTTGGGTGGGGAGGAGACACTAACTATATCTCAGGTGGCTTCTGTTGCTAACCATAACTCACAAGTTAAGGTTGACCTCTCAGAGTCTGCAAGAGCAGGAGTTGAGGCCAGCTGCGAATGGATCATGGAAAACATTAACAAAGGCACTCCCATTTATGGTGTTACCACTGGCTTTGGTGCTGCCTCTAACAGACAAACCAAACAAGGCATTGCTCTTCAGAAGGAGATGGTTAGGTTTTTAAACTGCGCAATATTTGGATATGAAACAGAGTTATCTCATACACTGCCTCAGTCAGCAACCAGAGCAGCTATGCTTGTGAGGGTTAATACCCTTCTGCAAGGGTATTCAGGCATTAGATTTGAAATCTTAGAAGCTATCACCAAACTTCTCAACCACAATGTCACCCCCATCTTGCCATTACGTGGTACAATTACTGCTTCTGGTGATCTAATTCCTCTGTCCTACATTGTTGCATTGCTAACAGGTAGGCGAAACTCCAAAGCTGTTGGACCCTCTGGAGAGACCCTTAATGCCAAGGAAGCTTTCCATTTAGCAGGTCTGAATTCTGGGTTCTTTGAGTTGAAGCCCAAGGAAGGGCGTTGCCCTTGTAAATGGCACAGCTGTTGGATCTGGTGTAGCTGCAAAGAATTTACACATCATCTTATACACAAGCTGAAGTACCATCCTGGTCAAATTGAGGCTGCTGCTATTATGGAACATATTTTAGATGGAAGCTCTTATGTCAAAAATGCTAAACTGCAACAGACAGATCCATTGCAGAAGCCTAGAAAAGATCGTTATGCTCTTCAAACTTCTCCTCAGTGGCTTGGTCCACAGATTGAAGTCATCCGGTATTCAACCAGATCAATTGAAAGGGAGATAAATTCAGTCAATGACAATCCTTTGATTGATGTCACAAGGAATAAGGTTCTGAATGGTGGTAATTTCCAAGGCACCCCAATTGGAGTTTCAATGGATAATGCACGTTTAGCTGTAGCTTCAATTGGCAAACTCATCTTTGCCCAATTTACCGAGCTAGTCAATGACATTTATAATAATGGGTTACCATCAAATCTCTCTGCTGGTAGAAACCCAAGTCTGGATTATGGTTTTAAGGCATCGGAAGTTGCCATGGCTGCTTATTGTTCTGAACTTCAATATTTAGCAAACCCTGTAACAAGCCATGTGCAAAGTGCAGAGCAGCACAACCAAGATGTGAATTCTTTGGGCTTAATTTCTGCCTGGAAAACTGTCGAAGCTGTTGAGATATTGAAGCTCATGTCTTCCACATATTTGGTTGCACTCTGTCAAGCTATTGACTTGAGGCATTTGGAGGAAATTTTTTAA 1500 0.4307 MNMATIIPQNANLCVSDSDPLNWDSAANSLKGSHFDEVKRMVAEYRKPVICLGGEETLTISQVASVANHNSQVKVDLSESARAGVEASCEWIMENINKGTPIYGVTTGFGAASNRQTKQGIALQKEMVRFLNCAIFGYETELSHTLPQSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNVTPILPLRGTITASGDLIPLSYIVALLTGRRNSKAVGPSGETLNAKEAFHLAGLNSGFFELKPKEGRCPCKWHSCWIWCSCKEFTHHLIHKLKYHPGQIEAAAIMEHILDGSSYVKNAKLQQTDPLQKPRKDRYALQTSPQWLGPQIEVIRYSTRSIEREINSVNDNPLIDVTRNKVLNGGNFQGTPIGVSMDNARLAVASIGKLIFAQFTELVNDIYNNGLPSNLSAGRNPSLDYGFKASEVAMAAYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISAWKTVEAVEILKLMSSTYLVALCQAIDLRHLEEIF 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi646g00019 499 Gene3D - 10 252 IPR024083 -
Sebi646g00019 499 PANTHER HISTIDINE AMMONIA-LYASE 266 497 IPR001106 -
Sebi646g00019 499 SUPERFAMILY L-aspartase-like 19 496 IPR008948 GO:0003824
Sebi646g00019 499 CDD PAL-HAL 56 493 IPR001106 -
Sebi646g00019 499 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 193 209 IPR022313 GO:0016841
Sebi646g00019 499 Gene3D Fumarase/aspartase (Central domain) 261 498 - -
Sebi646g00019 499 Pfam Aromatic amino acid lyase 266 494 IPR001106 -
Sebi646g00019 499 Pfam Aromatic amino acid lyase 58 250 IPR001106 -
Sebi646g00019 499 FunFam Phenylalanine ammonia-lyase 10 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi646g00019 Sebi-Chr646 213340 215014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi646g00019 9 497 Monolignol Biosynthesis Gene Families AT2G37040 70.019 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi646g00019 K10775 - gmx:100787872 840.106