Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi646g00016 ATGGCTACACAAGCTCTAGTATCTTCATCATCTCTTACCTTCTCAGCTGAGGCTGCCAAACAGAGCCTTGGAGCAAGATCACTCCAATCTCCAATTGGGTTCTCCAAAAAATGTTCCTTTATTGTCAAGGCAGCTTCTACTCCTCCTGTCAAGCAAGGAGCAAATAGACCCTTGTGGTTTGCATCAAAGCAGAGTCTTTCTTACTTGGATGGAAGCCTTCCCGGTGACTATGGATTTGACCCTCTTGGACTTTCAGATCCAGAAGGAACAGGAGGGTTCATTGAGCCAAAATGGCTAGCATATGGTGAGATCATCAATGGTCGTTTTGCAATGTTGGGTGCAGCTGGTGCTATTGCACCTGAAATTCTTGGCAAGGCTGGTCTGATTCCAGAGGAAACAGCACTCCCATGGTTCAAAACCGGTGTGATTCCACCTGCAGGAACATACAGCTACTGGGCAGACCCTTACACATTGTTTGTGTTGGAGATGGCACTGATGGGATTTGCAGAGCACAGGAGATTCCAAGATTGGGCCAAACCAGGGTCTATGGGGAAGCAATACTTCTTAGGACTAGAGAAAGGTCTTGGAGGTTCAGGTGACCCAGCTTACCCTGGTGGACCTTTCTTTAACCCTCTTGGTTTTGGTAAGGATGAGAAATCCATGAAGGATTTAAAGCTGAAGGAAGTGAAGAATGGAAGGTTGGCCATGTTGGCAATATTGGGTTACTTTGTTCAAGGTCTTGTCACAGGTGTTGGGCCATACCAAAACCTCCTAGATCATCTGGCTGACCCTGTGAACAACAATGTCTTGACCAGTCTCAAGTTTCACTGA 831 0.4657 MATQALVSSSSLTFSAEAAKQSLGARSLQSPIGFSKKCSFIVKAASTPPVKQGANRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPEETALPWFKTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPFFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi646g00016 276 Pfam Chlorophyll A-B binding protein 67 245 IPR022796 -
Sebi646g00016 276 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 7 271 IPR001344 GO:0009765|GO:0016020
Sebi646g00016 276 FunFam Chlorophyll a-b binding protein, chloroplastic 57 275 - -
Sebi646g00016 276 SUPERFAMILY Chlorophyll a-b binding protein 55 272 - -
Sebi646g00016 276 Gene3D Chlorophyll a/b binding protein domain 58 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi646g00016 Sebi-Chr646 205873 207156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi646g00016 19 276 Chloroplast and Mitochondria Gene Families AT1G61520 88.372 7.36e-169 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi646g00016 K08909 - gmx:100784090 518.079