Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi646g00015 ATGTTTGGGTTTATGTTCACTGGAAAATGGATAGAGAGATCAAAAGGCTTGGAAAGATACCCGTGGCGCAAATGTTCTGATTTTATACCTAGAATGGGAGTTGGCCGTGAAGTCTCAATCTCCCTCGATGGAGTGAGGGACAAGAACATTATGCAGCTCAAGAAGCTCAATATTGCTCTTTTCCCTGTTCGATACAATGACAAATACTATGCTGATGCTCTTGCTTCCGGGGAATTCACTAAACTAGCTTACTACAGTGATATTTGTGTCGGTGCAATTGCATGCCGGCTTGAGAAGAAGGAAGGTGGGGGGCAAGTTCGGGTTTATATCATGACTTTAGGTGTCTTAGCACCTTACCGTGGTCTTGGTATTGGTACAAAGCTATTGAATCATGTTCTTGATCTTTGCTCTAAGCAAAACATTTCTGAGGTTTACTTGCATGTGCAGACGAACAATGAAGACGCCATAAACTTTTATAAGAATTTTGGGTTTGAAATTACAGAAACAATCCATAACTATTATACAAATATCACACCACCAGACTGCTTTGTTCTCACGAGGCATACACTTCCAAGCCCCATGAAGAAATAA 591 0.4095 MFGFMFTGKWIERSKGLERYPWRKCSDFIPRMGVGREVSISLDGVRDKNIMQLKKLNIALFPVRYNDKYYADALASGEFTKLAYYSDICVGAIACRLEKKEGGGQVRVYIMTLGVLAPYRGLGIGTKLLNHVLDLCSKQNISEVYLHVQTNNEDAINFYKNFGFEITETIHNYYTNITPPDCFVLTRHTLPSPMKK 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi646g00015 196 FunFam Putative n-alpha-acetyltransferase 50 37 190 - -
Sebi646g00015 196 Pfam Acetyltransferase (GNAT) family 79 164 IPR000182 GO:0016747
Sebi646g00015 196 CDD NAT_SF 82 147 - -
Sebi646g00015 196 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 47 185 IPR016181 -
Sebi646g00015 196 Gene3D - 36 189 - -
Sebi646g00015 196 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 40 191 IPR000182 GO:0016747
Sebi646g00015 196 PANTHER N-ALPHA-ACETYLTRANSFERASE 36 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi646g00015 Sebi-Chr646 200867 204209 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Sebi646g00015 Acetyltransf_1 4.8e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi646g00015 K20793 - gmx:100499961 313.923