Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi645g00004 ATGATGTGGGAATGGGAAGATGAATTGAACGACGATTCCACCTCTACACCCCAACAAGAACAACCTTACCCTGATTCCTATCTCAATTTCGATTTCTTCTCTGCTCTCTCCAAGCCCAAGGATTATTACAAGATATTGGAAGTGGATTATGATGCTACTGAAGATGCTATTCGCTCCAATTACATTCGTCTTGCTCTGAAATGGCACCCGGATAAGCAAAAGGACCAAGATTCCGCTACTTCACGGTTTCAAGAGATAAACGAGGCTTATCAGGTTTTGAGTGATCCAGTCAAACGGAGAGAATATGACAAAGACGGGATGCATTTCGTATATGATTACAATATCATT 348 0.4138 MMWEWEDELNDDSTSTPQQEQPYPDSYLNFDFFSALSKPKDYYKILEVDYDATEDAIRSNYIRLALKWHPDKQKDQDSATSRFQEINEAYQVLSDPVKRREYDKDGMHFVYDYNII 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi645g00004 116 SMART dnaj_3 40 98 IPR001623 -
Sebi645g00004 116 SUPERFAMILY Chaperone J-domain 37 110 IPR036869 -
Sebi645g00004 116 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 115 - -
Sebi645g00004 116 Pfam DnaJ domain 41 103 IPR001623 -
Sebi645g00004 116 Gene3D DnaJ domain 33 113 IPR036869 -
Sebi645g00004 116 PRINTS DnaJ domain signature 78 98 IPR001623 -
Sebi645g00004 116 PRINTS DnaJ domain signature 61 76 IPR001623 -
Sebi645g00004 116 PRINTS DnaJ domain signature 43 61 IPR001623 -
Sebi645g00004 116 PRINTS DnaJ domain signature 98 116 IPR001623 -
Sebi645g00004 116 ProSiteProfiles dnaJ domain profile. 41 106 IPR001623 -
Sebi645g00004 116 ProSitePatterns Nt-dnaJ domain signature. 83 102 IPR018253 -
Sebi645g00004 116 FunFam Chaperone protein DNAj, putative 33 116 - -
Sebi645g00004 116 MobiDBLite consensus disorder prediction 1 23 - -
Sebi645g00004 116 CDD DnaJ 41 95 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi645g00004 Sebi-Chr645 216238 219423 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi645g00004 34 103 C2H2 Transcription Factor Family AT1G74250 42.667 7.95e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi645g00004 - - var:108338470 189.119