Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi644g00035 ATGGATTCACCCTTAACCTTGAACTCTTCCAATTCAGAATTCTCCTCAGAATCCTCATCTTTCGAGTTCAATTACCTTCCTTTCAACGAGAACGATCCTGAGGAGATGCTTCTCTATGGCATGATCACCGACGCCAATAGTAACACCCTCTTCAATCAGTCCTTTGATACAAGCAACAGAGTGAAGGAAGAGGAGGTGAGTTCTGAAGAAAATGGTGGTGATAGCGCCAGGAAGGAGAAGTCGTACCGAGGTGTTAGAAGACGGCCATGGGGGAAGTTTGCAGCAGAGATAAGGGATTCAACGAGACATGGGATAAGGGTTTGGTTGGGGACTTTTGATAGTGCTGAAGCTGCGGCTTTGGCTTATGATCAAGCTGCTTTTTCTATGAGGGGTTCTGCGGCTATACTCAATTTCCCTGTTGAAATTGTGAGGGAATCGTTAAAGGAGATGAATTGTGGTGGGCATGGTGTTGGTGAAACAGAGTGCTCCCCTGTTGTTGCTCTCAAGAGGAAGCACTCGTTGAGGAGGAAAATTGGTGTCAAGAAGAATAATAAAGAAAGAGATGTTGTTATTAGGAGTAATAGGATGGACAATGCTGTAGTGTTTGAAGATCTTGGTGCTGATTACTTGGAACAATTATTGATGTCTTCTGATGAAATCCCTAGTGCTTGGTGA 675 0.4415 MDSPLTLNSSNSEFSSESSSFEFNYLPFNENDPEEMLLYGMITDANSNTLFNQSFDTSNRVKEEEVSSEENGGDSARKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPVEIVRESLKEMNCGGHGVGETECSPVVALKRKHSLRRKIGVKKNNKERDVVIRSNRMDNAVVFEDLGADYLEQLLMSSDEIPSAW 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi644g00035 224 MobiDBLite consensus disorder prediction 58 81 - -
Sebi644g00035 224 PRINTS Ethylene responsive element binding protein signature 82 93 IPR001471 GO:0003700|GO:0006355
Sebi644g00035 224 PRINTS Ethylene responsive element binding protein signature 105 121 IPR001471 GO:0003700|GO:0006355
Sebi644g00035 224 FunFam Ethylene-responsive transcription factor 2 80 141 - -
Sebi644g00035 224 Gene3D AP2/ERF domain 80 141 IPR036955 GO:0003700|GO:0006355
Sebi644g00035 224 SMART rav1_2 81 145 IPR001471 GO:0003700|GO:0006355
Sebi644g00035 224 SUPERFAMILY DNA-binding domain 81 141 IPR016177 GO:0003677
Sebi644g00035 224 ProSiteProfiles AP2/ERF domain profile. 81 139 IPR001471 GO:0003700|GO:0006355
Sebi644g00035 224 PANTHER DNA-BINDING DOMAIN 44 215 IPR044808 GO:0003700|GO:0009873
Sebi644g00035 224 CDD AP2 80 140 IPR001471 GO:0003700|GO:0006355
Sebi644g00035 224 Pfam AP2 domain 81 131 IPR001471 GO:0003700|GO:0006355
Sebi644g00035 224 MobiDBLite consensus disorder prediction 56 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi644g00035 Sebi-Chr644 558010 558684 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi644g00035 26 218 AP2-EREBP Transcription Factor Family AT3G23240 61.140 3.80e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sebi644g00035 AP2 8.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi644g00035 K14516 - gmx:100790598 267.314