Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi644g00034 ATGGAGGAGCATCACAAGGGGAAACATGGAAAGGAGCTGGAGAAAGGAAGGGAAGAGGTCCGGTACCGAGGTGTCCGGCGGCGGCCGTGGGGGAAGTATGCGGCGGAGATAAGAGATCCATCGAAGCAAGGGACAAGGCTGTGGTTGGGGACATTTGATACTGCTGAAGAGGCTGCTAGAGCTTATGATAGAGCAGCTTTTAATTTGAGGGGTCATCTTGCAATTCTGAATTTTCCTAATGAGTACTATTCTCAAATAAGGGGCTCACCACCATATCCACCTCATTTGGCATCTCCTAATTCTTCTTCTTCTGCCAGTACTTCTCAGAGTCATAGGCATGTCTTTGAGTTTGAGTGTTTGGATGATAAGGTGTTTGGAGGAACTTCTTGA 390 0.4769 MEEHHKGKHGKELEKGREEVRYRGVRRRPWGKYAAEIRDPSKQGTRLWLGTFDTAEEAARAYDRAAFNLRGHLAILNFPNEYYSQIRGSPPYPPHLASPNSSSSASTSQSHRHVFEFECLDDKVFGGTS 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi644g00034 129 Pfam AP2 domain 21 72 IPR001471 GO:0003700|GO:0006355
Sebi644g00034 129 MobiDBLite consensus disorder prediction 1 20 - -
Sebi644g00034 129 SUPERFAMILY DNA-binding domain 21 80 IPR016177 GO:0003677
Sebi644g00034 129 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Sebi644g00034 129 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Sebi644g00034 129 FunFam Ethylene-responsive transcription factor 2 20 80 - -
Sebi644g00034 129 ProSiteProfiles AP2/ERF domain profile. 21 79 IPR001471 GO:0003700|GO:0006355
Sebi644g00034 129 SMART rav1_2 21 85 IPR001471 GO:0003700|GO:0006355
Sebi644g00034 129 Gene3D AP2/ERF domain 20 81 IPR036955 GO:0003700|GO:0006355
Sebi644g00034 129 PANTHER DNA-BINDING DOMAIN 15 107 IPR044808 GO:0003700|GO:0009873
Sebi644g00034 129 CDD AP2 21 80 IPR001471 GO:0003700|GO:0006355
Sebi644g00034 129 MobiDBLite consensus disorder prediction 87 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi644g00034 Sebi-Chr644 506852 507241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi644g00034 18 125 AP2-EREBP Transcription Factor Family AT3G23230 68.142 1.19e-46 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi644g00034 AP2 3e-17 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi644g00034 - - gmx:100793703 162.925