Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi641g00014 ATGGTTGGAGACACTCCAAGTATTTGGGCTGTCCTTCCTACCTTCCACCCTGAGATCAAGGTGGCTCTTTTAGGTGGGAGTGAAAGTGGGACACACACCAGAAAATTTGCAAAGTCAAGAAGTAATGATGCATCTGAAAACAACAGTGACAGCAGTGATGAGAATGACTATGGAAGCAGAGGCTTGAGTGTTCGAGGTGGAAGTGACAATGGAAGTGGCACTCAGAGTTCATGGACTAAATGTCTAGCTCAAGTTGGCAGTCCTCATCCAGTTTCTCCTCATAAACAATTGGCCGATGCCCCTGATAGCACGTGTGCCCAAGTGATGCATACAAAGCCTGAAAAAGTCAGTAGTATATGGGTGCATGCGACAGAAAAAGAGTGCCATGAACTAATTGATCATCTTGATGATGTCGCAATGGGTAAAGACTTGGCTATGGGAATATCTCTGAATATTCAACTAGAGCATCCACCTGAGGAACTGTCTAGCAATCCAATGGGTAAAGGGACAAATAAGATGTCTGATATGGATCGCATGCAGCTGATTAAAGGACAGAGTAATGTCTGTGAAAAAGGAAAACTGGAATACAACGGTGATAAAACCAGGACACAGGAAAATCAAGCTATGAATGTTGTTGATGTTACTGATAGCAACAGTCCACAGGCTGAAAGCAGAGACTTGAACACTCCAAATGGGTTTTCTGGCTTCTCACAAACAAAAGCAAGCAGTTCCTTCAAACAGCATCCATCCCTCGAACTAACTTTGAAGAGGCTGGGAGAAGTAAGAGATGTTAAAAATGTCACAGGTGATGAATGCAATATTTTGAGACATTCAGATCTGTCAGCATTCTCAAAATATAATACTGCTTCTTCTGCTAATCAGGCTCAAACTGGAAATGGTGGAAGCTGTTCCCCCCTAGACAATAGCTCAGTTGCACCAAATACAGAGATAATACACAACTTTCCATCTAATTCAAATGGCACACCTCGAAATCAACAGTCTAATGAGAGCAACAACATCAATGACATGGCCTCCACTAATACATATCTTAGCACTAAACCTGAAACTTTTGACAAGAAGCCAGAGTCTGTAAGAGGGATTGGCTCATTTAATTCTTCTGAACTCCAGACTGTGCAGAACAATAGTATCTCTTCATCTCAGAAGAAAACTTCTGCCCAAGAAGAATATGCAGAAATTGTTAGAGGACAAGTGGGAGGCTCTGAACAAGGATTCCAAGTCGAGCACACTCATTATCAGCTTCAGCATCATAATCACGTTGCCCATAGAGCCACAGTAGATCTCCAATCAGACCATGATCTTTTACGAAAAAGCTCAAGCAAAGCTACTCAGCAATGTGTATCATCAAATGCGTTTGGACCAGCAGAAAGCAATGCTGCAAACTATGGGTTGGATGGAAATGCAGCTGAGAGCGATCATGGGAGCAATGGACAGGACGGAAGCAATAGCTTGACAATAAGAACAATGAATATGGAGAATGGCAATGTGGCTGCTGGGAGTTTTGGAGTTGGTGGCATTGATAGGATAAACATTGTGAATGGGGTAGATGAAGGACGAATTGCGTTGAGAGAGGCTGCCTTGACCAAATTTCGCCAAAAGAGAAAAGAAAGATGCTTTGAAAAGAGGGTTCGATATCACAGCAGGAAAAAACTAGCAGAACAGCGGCCACGTATAAGGGGGCAATTTGTAAGACGAATAGTGTCCGATACCATAGAAGAAAGAGATAAACAAAGCGACAACCTGGCATCTATGGATAATTCTAGCGACACTAGCCCGTTTTACACGTTCACCTGGGAAGAAGCTTGGAGGTCTGTGCTCGAGGAATCTGTGAGTAGGTTTCTTGAATTGGTTGTCGCTGAAAAGAAAGGGAGCATGGAGTTTCATAACTACGAAGCAGGGACAGTTCAGGGAATGAGCCATGTCCTCTGA 1947 0.4314 MVGDTPSIWAVLPTFHPEIKVALLGGSESGTHTRKFAKSRSNDASENNSDSSDENDYGSRGLSVRGGSDNGSGTQSSWTKCLAQVGSPHPVSPHKQLADAPDSTCAQVMHTKPEKVSSIWVHATEKECHELIDHLDDVAMGKDLAMGISLNIQLEHPPEELSSNPMGKGTNKMSDMDRMQLIKGQSNVCEKGKLEYNGDKTRTQENQAMNVVDVTDSNSPQAESRDLNTPNGFSGFSQTKASSSFKQHPSLELTLKRLGEVRDVKNVTGDECNILRHSDLSAFSKYNTASSANQAQTGNGGSCSPLDNSSVAPNTEIIHNFPSNSNGTPRNQQSNESNNINDMASTNTYLSTKPETFDKKPESVRGIGSFNSSELQTVQNNSISSSQKKTSAQEEYAEIVRGQVGGSEQGFQVEHTHYQLQHHNHVAHRATVDLQSDHDLLRKSSSKATQQCVSSNAFGPAESNAANYGLDGNAAESDHGSNGQDGSNSLTIRTMNMENGNVAAGSFGVGGIDRINIVNGVDEGRIALREAALTKFRQKRKERCFEKRVRYHSRKKLAEQRPRIRGQFVRRIVSDTIEERDKQSDNLASMDNSSDTSPFYTFTWEEAWRSVLEESVSRFLELVVAEKKGSMEFHNYEAGTVQGMSHVL 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi641g00014 648 MobiDBLite consensus disorder prediction 216 247 - -
Sebi641g00014 648 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 87 589 IPR045281 GO:0009909
Sebi641g00014 648 MobiDBLite consensus disorder prediction 468 491 - -
Sebi641g00014 648 MobiDBLite consensus disorder prediction 292 365 - -
Sebi641g00014 648 Pfam CCT motif 529 570 IPR010402 GO:0005515
Sebi641g00014 648 MobiDBLite consensus disorder prediction 292 354 - -
Sebi641g00014 648 MobiDBLite consensus disorder prediction 477 491 - -
Sebi641g00014 648 MobiDBLite consensus disorder prediction 28 77 - -
Sebi641g00014 648 ProSiteProfiles CCT domain profile. 529 571 IPR010402 GO:0005515
Sebi641g00014 648 MobiDBLite consensus disorder prediction 42 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi641g00014 Sebi-Chr641 328896 336398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi641g00014 46 576 Response Regulator Gene Family AT5G02810 35.145 1.11e-52 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi641g00014 CCT 1.5e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi641g00014 K12129 - gmx:100785796 747.273