Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi641g00013 ATGAATAATAATGTTGGGAAACGAAGTTTGGCAGAACAAAGTCATATGTTTTTTGATGAAAAGAGTCTCAATAGTGGAGTAGTTAATGGAGGGCTAGGCTCTGGATCATCAACAGAAGATGACAAAAGATTTAATAAGATAACCCAAGTGGGAAGCAATGGATTGAGGGGACTGATTCAAATCCATGAGAGCTTGCAGAATTCCCAACAACCACCTCAAGGTCCAGTCATATGCTGGGAGAGATTTCTCCCTGTAAGATCAATAAAAATTCTGCTGGTAGAAGATGATGATTCAACACGCCATGTTGTCCGTGCTCTGTTACGGAATTGTAGTTATGAAGTCACTGCTGTTTCCAATGGTCTTCAAGCATGGAAAGTCCTAGAAGATCCAGGAAATCACATAGATCTTGTCCTAACAGAGGTAGCTATGCCTATTTTATCTGGAATAGGTCTTTTGTGCAAGATCATGAGCCACAAAACTTTAAAGAATATCCCCGTGATTAGTAAGTGCATTTCATAA 519 0.395 MNNNVGKRSLAEQSHMFFDEKSLNSGVVNGGLGSGSSTEDDKRFNKITQVGSNGLRGLIQIHESLQNSQQPPQGPVICWERFLPVRSIKILLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVLEDPGNHIDLVLTEVAMPILSGIGLLCKIMSHKTLKNIPVISKCIS 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi641g00013 172 ProSiteProfiles Response regulatory domain profile. 89 172 IPR001789 GO:0000160
Sebi641g00013 172 SUPERFAMILY CheY-like 86 167 IPR011006 -
Sebi641g00013 172 Gene3D - 87 168 - -
Sebi641g00013 172 Pfam Response regulator receiver domain 90 167 IPR001789 GO:0000160
Sebi641g00013 172 PANTHER TWO-COMPONENT RESPONSE REGULATOR 89 169 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi641g00013 Sebi-Chr641 314365 315639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi641g00013 35 167 Response Regulator Gene Family AT5G60100 60.150 1.23e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi641g00013 Response_reg 4.1e-11 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi641g00013 K12129 - gmx:100785796 281.182