Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi641g00004 | ATGTTAGATCTTAATCTCAATGTGAACTCGACCGATTCGACTCAGAACGGCGACTCGTCGGCGCTTTTGGAGAAGCTTCATGAAGGTTCCTGGAACCAAATGGCGGAGTCAGGGACCTCGAATTCCTCCGTCGTCAATGCGGACGGGTCTAGCAACGGCGCAGGGGACGAGGACTCGTGCTCCACGCGCGCCGACGACGTGTTCACCTTCAATTTCGATATCCTTAAGGTGAAAGGCGCAAACGACGTCGTGACGAAGGAGCTGTTCCCGGTGAGTGGAGGAGCTAAAGGAGTGGATGAAGGCGGGTCCGGGAATTGGCAGTGGCAGGCTACGTCGTCGTTTCCGCCGAGGAATAATGGCTCGGTGGATCTCTCGTTCGATCGCCAGGGTGGGAACAGCGAGATGAAGATGGTTCAGCCTCAGCAACAAGCGAAGAAGAGTAGAAGGGGACCAAGGTCTCGGAGCTCGCAATACAGAGGAGTCACCTTTTACAGAAGGACCGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAACAAGTCTATTTGGGTGGATTTGACACAGCCCATGCTGCTGCTAGAGCCTATGATCGAGCTGCTATTAAGTTCAGGGGAGTTGACGCTGACATCAATTTCAATCTGAGTGATTATGAGGATGATCTTAAACAGATGAAGAATTTATCCAAGGAGGAATTCGTGCACATACTCCGTCGCCAAAGTAATGGTTTCTCGAGGGGGAGCTCAAAATACCGAGGAGTAACACTCCACAAATGTGGCCGTTGGGAAGCTCGAATGGGACAATTCCTTGGCAAAAAGTATATATATCTTGGGTTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGACAAGGCAGCTATCAAATGCAATGGAAGGGAAGCAGTGACTAACTTCGAGCCAAGTACATACGAAGGAGAGATGAAATCTGCAGCCATTAATGAAGGTGGCAGTCAAAATCTCGACCTCAATTTGGGCATAGCAACCCCAGGACCTGGTCCCAAAGAAAACTTGGGGCAACTTCAGTTCTCCTCTGTCCCTTACAACATGCACGCTGGAAGAAGTTCAAGGATGGAAACCAATGTTAATTCAGGAATTGATAATCCATCTTTGAAAAGGCGGGTTGTTACTGAAGAGCGTCCTTCTGTATGGAATGACATGTGTCCTAGTTTCTTTCCCAATGAGGAAAGAGCAGAGCGTTTCAGCATAGATCCTTCAGAAGGACTCCCCAATTGGGCGTGGCAAACACATGGCCAGGTCACTGCTACGCTAGTGCCACCGTTCTCTGCTGCAGCAGCATCATCAGGATTCTCAATATCAGCTAGCTTTCCACCAACTGCCATTTTTCCAACAAGATCTATGAGCTCAATTCCATAG | 1395 | 0.4932 | MLDLNLNVNSTDSTQNGDSSALLEKLHEGSWNQMAESGTSNSSVVNADGSSNGAGDEDSCSTRADDVFTFNFDILKVKGANDVVTKELFPVSGGAKGVDEGGSGNWQWQATSSFPPRNNGSVDLSFDRQGGNSEMKMVQPQQQAKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYEDDLKQMKNLSKEEFVHILRRQSNGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDSEVEAARAYDKAAIKCNGREAVTNFEPSTYEGEMKSAAINEGGSQNLDLNLGIATPGPGPKENLGQLQFSSVPYNMHAGRSSRMETNVNSGIDNPSLKRRVVTEERPSVWNDMCPSFFPNEERAERFSIDPSEGLPNWAWQTHGQVTATLVPPFSAAAASSGFSISASFPPTAIFPTRSMSSIP | 464 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi641g00004 | 464 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 123 | 341 | - | - | |
Sebi641g00004 | 464 | MobiDBLite | consensus disorder prediction | 34 | 58 | - | - | |
Sebi641g00004 | 464 | Pfam | AP2 domain | 157 | 205 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi641g00004 | 464 | Pfam | AP2 domain | 248 | 298 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi641g00004 | 464 | MobiDBLite | consensus disorder prediction | 34 | 60 | - | - | |
Sebi641g00004 | 464 | MobiDBLite | consensus disorder prediction | 104 | 146 | - | - | |
Sebi641g00004 | 464 | SUPERFAMILY | DNA-binding domain | 248 | 307 | IPR016177 | GO:0003677 | |
Sebi641g00004 | 464 | ProSiteProfiles | AP2/ERF domain profile. | 157 | 213 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi641g00004 | 464 | ProSiteProfiles | AP2/ERF domain profile. | 249 | 306 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi641g00004 | 464 | PRINTS | Ethylene responsive element binding protein signature | 250 | 261 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi641g00004 | 464 | PRINTS | Ethylene responsive element binding protein signature | 288 | 308 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi641g00004 | 464 | FunFam | AP2-like ethylene-responsive transcription factor | 248 | 308 | - | - | |
Sebi641g00004 | 464 | CDD | AP2 | 157 | 215 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi641g00004 | 464 | MobiDBLite | consensus disorder prediction | 95 | 158 | - | - | |
Sebi641g00004 | 464 | CDD | AP2 | 248 | 308 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi641g00004 | 464 | SMART | rav1_2 | 249 | 312 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi641g00004 | 464 | SMART | rav1_2 | 157 | 219 | IPR001471 | GO:0003700|GO:0006355 | |
Sebi641g00004 | 464 | Gene3D | AP2/ERF domain | 248 | 307 | IPR036955 | GO:0003700|GO:0006355 | |
Sebi641g00004 | 464 | Gene3D | AP2/ERF domain | 156 | 214 | IPR036955 | GO:0003700|GO:0006355 | |
Sebi641g00004 | 464 | SUPERFAMILY | DNA-binding domain | 156 | 214 | IPR016177 | GO:0003677 | |
Sebi641g00004 | 464 | FunFam | AP2-like ethylene-responsive transcription factor | 156 | 215 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi641g00004 | Sebi-Chr641 | 38206 | 41573 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi641g00004 | 1 | 453 | AP2-EREBP Transcription Factor Family | AT5G60120 | 45.473 | 6.14e-100 | 306 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-AP2 | Sebi641g00004 | AP2 | 2.7e-09 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi641g00004 | K09284 | - | gmx:100788303 | 706.827 |