Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi640g00019 ATGCTGACTCTTCCCAAACCCTTTCCTTCGCTTCAACTTAAAATCCAAGTCGCCAAACTCGCCCATGCTTTTCTCCACCTCGGCATCAACAAAAACGACGTCGTTCTCCTCCTCGCTCCCAACAGCATCCATTTCCCCATATGCTTCCTCGCCGCAACCGCCATCGGCGCCGTCGTCTCCACCGCCAACCCTATTTACACCGTCGTGGAAATCTCGAGACAAGTCAATGACTCCAAACCGAAGCTGATTATCACAGTCCCTGAATTATGGAACAAAGGTCCGTTACAGAGTTGCCGAAAAAACGACGTGAAGCAGGGCGATACGGCGGCGCTTTTTATACTCTTCGGGCACCACGGGGGTGAGCAAGGGGGTGGTACTCACGCACGGGAACTTCATCGCGGCGTCGCTTATGGTGGCCATGGACGACGATTTGGCTGGGGAGTTTCACAGCGTGTGCCTCTGCGTTTTGCCAATGTTTCACGTCTTTGGGTTATCGATCATCGTTTACTCGCAGCTCCGGCGAGGGAGTGCGGTGGTGTCAATGGCGAGGTTCGAGTTGGAGGCGTTTCTGAGGCCATCGAGAAGCACAGAGTGACGAACCTGTGGCTGGTGCCTCCCATTGTGCTTGCTCTGGCGAAACAGAGTGTGGTTAGTAACTATGATCTTTCGTCGTTGAAGCGTATTGGGTCTGGTGCTGCCTCCTCTTGGAAAAGAATTGATGGAGGAGGCTATGGTATGACAGAAACTTGTGGCATTGTTTCTGTGGAGAATCCAAGAGTAGGGATTCGTCATACTGGTTCAGCTGGAATGCTGGTGTCAGGAGTGGAAGCTCAAATAGTGTCTGTGAATAGTAATACACAGAAGCCGCTCCCTCCGAGACAATTGGGGGAATTATGGATTCGGGGTCCTAAACATGATGCAAGATTCTTCTTGTTTAACTCAATGTTTTCTGCTGGGATGTGGGGGATCAACATGTTTTACTTTATATGGAGGTATCATAACAATCCAGAGGCCACAAGATTGACTTTAGATGAAAAAGGGTGGGTACATACAGGAGATCTTGGATATTTTGATGAGGATGGGCAACTCTTTGTTGTTGACCGTATCAAAGAGCTTATCAAGTATAAAGGATTTCAGGTTGCACCAGCAGAACTTGAAGGACTTCTCATTTCTCACCCTGAAATTCTAGATGCCGTTGTCGTCCCATATCCGGATGATGAGGCTGGTGAGGTTCCACTTGCTTATGTTGTTCGTTCACCCAACAGTTCACTTACTGAAGAAGAAATTAAGAAATTTATTGCTAATCAGGTTGCACCTTTCAAAAGATTGCGAAGGGTGACATTCATCAGCAGTGTTCCTAAGACAGTTTCAGGAAAAATTCTCAGAAGAGAGCTTATTGCGAAAGCACGATCCAAAATATAA 1422 0.4782 MLTLPKPFPSLQLKIQVAKLAHAFLHLGINKNDVVLLLAPNSIHFPICFLAATAIGAVVSTANPIYTVVEISRQVNDSKPKLIITVPELWNKGPLQSCRKNDVKQGDTAALFILFGHHGGEQGGGTHARELHRGVAYGGHGRRFGWGVSQRVPLRFANVSRLWVIDHRLLAAPARECGGVNGEVRVGGVSEAIEKHRVTNLWLVPPIVLALAKQSVVSNYDLSSLKRIGSGAASSWKRIDGGGYGMTETCGIVSVENPRVGIRHTGSAGMLVSGVEAQIVSVNSNTQKPLPPRQLGELWIRGPKHDARFFLFNSMFSAGMWGINMFYFIWRYHNNPEATRLTLDEKGWVHTGDLGYFDEDGQLFVVDRIKELIKYKGFQVAPAELEGLLISHPEILDAVVVPYPDDEAGEVPLAYVVRSPNSSLTEEEIKKFIANQVAPFKRLRRVTFISSVPKTVSGKILRRELIAKARSKI 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi640g00019 473 Gene3D - 180 370 IPR042099 -
Sebi640g00019 473 FunFam 4-coumarate--CoA ligase 2 371 472 - -
Sebi640g00019 473 Pfam AMP-binding enzyme C-terminal domain 384 459 IPR025110 -
Sebi640g00019 473 Gene3D - 371 472 IPR045851 -
Sebi640g00019 473 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 12 467 - -
Sebi640g00019 473 Pfam AMP-binding enzyme 190 375 IPR000873 -
Sebi640g00019 473 Pfam AMP-binding enzyme 12 99 IPR000873 -
Sebi640g00019 473 Gene3D - 10 133 IPR042099 -
Sebi640g00019 473 SUPERFAMILY Acetyl-CoA synthetase-like 12 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi640g00019 Sebi-Chr640 279847 282895 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi640g00019 12 473 Monolignol Biosynthesis Gene Families AT4G05160 50.969 6.06e-157 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi640g00019 K01904 - gmx:100808944 531.176