Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi640g00017 ATGACAGAAACTAGTGGCATTGTTACTATGGAGAATCCAAGAGTAGGTATTCGTCATACTGGCTCAGCTGGAAAGCTAGTTTCAGGAGTGGAAGCTCAAATAGTGAGTGTGGATACACATATGCTGCTTCCTCCAAGACAATTGGGAGAATTATGGGTACGGGGTCCTAACATGATGCAAGGTTATCATAACAATCCACAGGCTACAAGATTGACTATAGATAAAAAAGGGTGGGTACATACAGGAGATCTTGGATATTTTGATGAGGATGGGCAACTTTATGTTGTTGACCGTATCAAAGAACTGATCAAGTATAAAGGTCTTCAGGTTTCCCCAGCAGAACTTGAAGGGCTTCTCGTTTCTCACCCTGAAATCCTAGATGCTGTCGTCGTCCCATATCCTGATGACAGGGCCGGAGAGGTTCCAATTGCCTATGTTGTATGTTCGCCCAATAGTCTACTAACTGAAGAAGAAGTTCAGAAGTTTATTGCTAATCAGGTTGCACCATTCAAAAGATTGTGA 522 0.4253 MTETSGIVTMENPRVGIRHTGSAGKLVSGVEAQIVSVDTHMLLPPRQLGELWVRGPNMMQGYHNNPQATRLTIDKKGWVHTGDLGYFDEDGQLYVVDRIKELIKYKGLQVSPAELEGLLVSHPEILDAVVVPYPDDRAGEVPIAYVVCSPNSLLTEEEVQKFIANQVAPFKRL 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi640g00017 173 Gene3D - 1 100 IPR042099 -
Sebi640g00017 173 SUPERFAMILY Acetyl-CoA synthetase-like 1 172 - -
Sebi640g00017 173 Pfam AMP-binding enzyme 1 105 IPR000873 -
Sebi640g00017 173 Pfam AMP-binding enzyme C-terminal domain 114 172 IPR025110 -
Sebi640g00017 173 Gene3D - 101 173 IPR045851 -
Sebi640g00017 173 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi640g00017 Sebi-Chr640 236686 238303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi640g00017 1 173 Monolignol Biosynthesis Gene Families AT4G05160 75.723 1.34e-93 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi640g00017 K01904 - gmx:100808944 315.849