Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi640g00009 ATGGCCGAGATCAGAGTAAGAAGCAAAAAGAAGGTTGTAGGTGGCATTTTGAAGCTCAAGATTGTCTTGGAAAAGCTTCAGAAGACTCTGTTACTTGGTAGAAATAAATTAAGTTCTTGTGGTGGCACAACCTCTGTGCCAGGGGATGTGAAGGAAGGACATTTTGCTGTGATTGCACAGGATGGGGAGGAGCCGCCAAAGAGATTTGCGGTGCCATTGAGGAGTTTAAGCAACACAACATTCTTGACGCTATTGGAGCAAGCAGCTGAAGAGTATGGGTTTGATCAAGATGGTGCACTAACCATTCCTTGCAGGCCTAGTGAGCTTGAGATGCTATTGGCCCAGCTATGGCAGGAAGAGGGTGGATCTCAAACTGTTGGGCTGAGCTGGAACTCTTGCCATAAAGCCATGGTTAAAAGTTACTGA 426 0.4624 MAEIRVRSKKKVVGGILKLKIVLEKLQKTLLLGRNKLSSCGGTTSVPGDVKEGHFAVIAQDGEEPPKRFAVPLRSLSNTTFLTLLEQAAEEYGFDQDGALTIPCRPSELEMLLAQLWQEEGGSQTVGLSWNSCHKAMVKSY 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi640g00009 141 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 34 112 IPR003676 GO:0009733
Sebi640g00009 141 Pfam Auxin responsive protein 33 114 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi640g00009 Sebi-Chr640 129978 130403 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi640g00009 47 113 Calmodulin-binding Proteins AT3G43120 49.254 1.38e-12 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi640g00009 K14488 - qsu:112024380 158.303