Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi63g00072 ATGAAGGACATCACAAACAGAGAGATGGCCAAGAAGGAAAAAGAAATTGAAAATGGGGGCTTTTCTTACTTGATGGACAATAATGAGGAAATTCCATCAGCACCTGCAACACCAGGTACTCCTGGTGCACCTCTTTTTGGTGGGTTTAACTCTGAGAGAACTGGGAATGGTATTAGGAATGGTAGGAAAAAGTCCCTCCTCAAAAATTGTAAGTGCTTCAGTGTTGAAGAGTGGACCATAGAAGATGGAGCCTTACCCACTGTCTCTTGCTCATTGCCACCCCCTCCTATCCCTCTTGCAAGAAAGGTGGGGGCTGAGTTTATAGGGACATTTATTCTGATGTTTGCTGGGACAGCAACTGCTATTGTGAACCAAAAGACAGAAGGCTCTGAGACTCTGATTGGATGTGCTGCCTCTACTGGTCTTGCTGTTATGATTGTCATCCTCTCCACTGGCCACATCTCTGGTGCTCATCTCAACCCTGCTGTCACCATTTCCTTTGCTGCATTAAAGCACTTCCCATGGAAGCATGTGCCTATGTATATTGGTGCACAAGTTTTGGCTGCTATATGTTCTGCATTTGCTCTGAAGGGGGTTTTTCACCCTTTCATGAGTGGTGGAGTCACTGTTCCTTCAGGAGGATATGGCCAAGCTTTTGCTTTGGAATTCATTATCAGCTTTAATCTCATGTTCGTTGTCACTGCAGTGGCCACCGACACAAGAGCTGTGGGAGAACTTGCGGGAATTGCAGTGGGAGCAACTGTCATGCTCAATATACTCATAGCAGGACCAGCATCAGGAGGCTCAATGAACCCAGTAAGAACACTAGGTCCAGCTATTGCCGCAAACAACTACAAAGGCATATGGATCTATCTGATAGCTCCCATACTTGGAGCTCTAGGTGGGGCAGGTACCTATACCGCAGTCAAGCTCTCTGAAGAAGATGATGACAAGGCAAAGGCTTCAAACACCCTGAGTTTCAGAAGGTGA 990 0.4636 MKDITNREMAKKEKEIENGGFSYLMDNNEEIPSAPATPGTPGAPLFGGFNSERTGNGIRNGRKKSLLKNCKCFSVEEWTIEDGALPTVSCSLPPPPIPLARKVGAEFIGTFILMFAGTATAIVNQKTEGSETLIGCAASTGLAVMIVILSTGHISGAHLNPAVTISFAALKHFPWKHVPMYIGAQVLAAICSAFALKGVFHPFMSGGVTVPSGGYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPASGGSMNPVRTLGPAIAANNYKGIWIYLIAPILGALGGAGTYTAVKLSEEDDDKAKASNTLSFRR 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi63g00072 329 Pfam Major intrinsic protein 100 305 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi63g00072 329 SUPERFAMILY Aquaporin-like 98 312 IPR023271 -
Sebi63g00072 329 ProSitePatterns MIP family signature. 158 166 IPR022357 -
Sebi63g00072 329 Gene3D Glycerol uptake facilitator protein. 96 322 IPR023271 -
Sebi63g00072 329 PANTHER AQUAPORIN NIP2-1 64 314 IPR034294 -
Sebi63g00072 329 PRINTS Major intrinsic protein family signature 289 309 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi63g00072 329 PRINTS Major intrinsic protein family signature 140 164 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi63g00072 329 PRINTS Major intrinsic protein family signature 221 239 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi63g00072 329 PRINTS Major intrinsic protein family signature 252 274 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi63g00072 329 PRINTS Major intrinsic protein family signature 101 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi63g00072 329 PRINTS Major intrinsic protein family signature 177 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi63g00072 329 CDD MIP 101 306 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sebi63g00072 329 FunFam Aquaporin NIP2-1 89 321 - -
Sebi63g00072 329 MobiDBLite consensus disorder prediction 27 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi63g00072 Sebi-Chr63 2398361 2403650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi63g00072 27 329 Major Intrinsic Protein MIP AT1G80760 76.774 3.55e-166 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi63g00072 K09874 - gmx:100815637 488.804