Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi63g00070 ATGTCAGGTGAAGAAGGGGCTGTTGTAGCTGAGCCAGCTGCTTCAATTCCAGGTGAGCCAATGGACATCATGACTGCCTTACAGCTTGTGCTGAGAAAGTCACTGGCTTATGGTGGTCTTGCACGGGGTCTTCATGAAGGTGCAAAAGTGATTGAGAAGCATGCTGCACAGCTCTGTGTTCTAGCAGAAGATTGTGACCAACCTGATTATGTCAAACTGGTGAAAGCCCTTTGTGCTGAGCACAATGTTAGCCTGTTGACAGTTCCTAGTGCAAAGACCCTTGGAGAATGGGCTGAAGGAAAAGCTAGGAAGGTAACTGGTTGCTCCTGTGTGGTTGTCAAGGATTTCGGAGAGGAACATGAGGCCTATAATGTTGTTCTGCAGCATGTGAAATCTCAATGA 402 0.4751 MSGEEGAVVAEPAASIPGEPMDIMTALQLVLRKSLAYGGLARGLHEGAKVIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAEGKARKVTGCSCVVVKDFGEEHEAYNVVLQHVKSQ 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi63g00070 133 Gene3D - 8 133 IPR029064 -
Sebi63g00070 133 PANTHER 40S RIBOSOMAL PROTEIN S12 16 132 - -
Sebi63g00070 133 SUPERFAMILY L30e-like 20 131 IPR029064 -
Sebi63g00070 133 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 26 114 IPR004038 -
Sebi63g00070 133 ProSitePatterns Ribosomal protein S12e signature. 26 44 IPR000530 GO:0003735|GO:0005840|GO:0006412
Sebi63g00070 133 PRINTS Ribosomal protein S12E family signature 85 106 IPR000530 GO:0003735|GO:0005840|GO:0006412
Sebi63g00070 133 PRINTS Ribosomal protein S12E family signature 30 43 IPR000530 GO:0003735|GO:0005840|GO:0006412
Sebi63g00070 133 PRINTS Ribosomal protein S12E family signature 44 60 IPR000530 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi63g00070 Sebi-Chr63 2335317 2336808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi63g00070 16 133 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 68.800 5.45e-58 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi63g00070 K02951 - gmx:100305687 244.202