Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi63g00066 ATGGACAATCAACAACAACAATCCAAGAACTCCAAGAGGAACATTCTCTTCAACAAGTACGAAATAGGGAGGCTCCTTGGCCAGGGGAATTTCGCCAAGGTCTACCACGGAAGAAACATAATCACCAACGAAAGCGTTGCCATCAAGGTGATAAAGAAAGAGAAGATGAAAAAAGAGAGGCTTGACAGGCTCGTGAAGCAGATCAAGCGTGAGGTTTCAGTGATGAGACTCGTTCGTCACCCCCACATCGTTGAGCTAAAAGAAGTGATGGCCAATAAAGCTAAAATCTTTATGGTTGTTGAATACGTTAAAGGAGGAGAACTCTTCGCCAAGGTTGCAAAGGGGAAAATGAAAGAAGAAATTGCTAGAAAGTACTTTCAACAACTCATCAGCGCCGTTGATTTCTGTCACAGCCGTGGCGTAACTCACCGTGATTTGAAGCCAGAGAATCTCCTCTTAGACGAGAACGAAGACCTTAAAGTTTCTGACTTTGGCTTGTCGGCGTTGCCGGAACAGCGTAGATCCGACGGAATGCTACTAACGCCGTGTGGAACGCCGGCTTACGTGGCACCGGAGGTTTTGAAGAAGAAAGGGTATGATGGGTCTAAAGCTGATATATGGTCTTGTGGGGTTATCCTCTTTGCTCTGCTTTCTGGGTATCTTCCATTTCAAGGTGAGAATGTGATGAGGATTTATAGCAAGTCTTTTAAAGCTGATTATGCTTTACCTGAATGGATCTCCCCTGAGGCTAAGAATTTGATCTCTAATTTGCTGGTTGTTGACCCTGAAAAGAGATACTCCATCCCTGATATAATGAAGGATCCTTGGTTTCAAATTGGGTTCTTGAGACCAATTGCTTTTTCAATGAAGGAATCTGCTATGGAAGATAACATTAATTTCAATGAGGATGATGATGGGAATAGTAGTGGAAGTAATAATGATGATGCTGAGTTGGTTGGGGCGAAGCCAGCTCGTCCTTCTTACAATGCATTTGAGATCATTTCTTCGTTGTCGCATGGTTTTGATCTTAGGAACTTGTTTGAGACGAGGAAGAGGTCACCTTCGATGTTCATTTCGAAGTTTTCGGCTTCGGCGGTGCTGGGGAAGCTTGAGGCGGTGGCGAAGAAGCTGAATTTTAGGGTAACGGGGAAGAAAGAGTTCATGGTGAGAATGCAGGGGGCAGAGGAGGGAAGGAAGGGGAAGCTGGCTATGACGGTGGAGGTTTTTGAGGTGGCGCCGGAGGTGGCTGTGGTGGAATTCTCTAAGTCTGCCGGAGACACACTTGAGTACATAAAATTCTGTGAGGATCAAGTCAGGCCTTCTCTCAAGGACATTGTTTGGAGCTGGCAAGGGGACAATAGTTGCCCTCAGTAG 1374 0.4556 MDNQQQQSKNSKRNILFNKYEIGRLLGQGNFAKVYHGRNIITNESVAIKVIKKEKMKKERLDRLVKQIKREVSVMRLVRHPHIVELKEVMANKAKIFMVVEYVKGGELFAKVAKGKMKEEIARKYFQQLISAVDFCHSRGVTHRDLKPENLLLDENEDLKVSDFGLSALPEQRRSDGMLLTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILFALLSGYLPFQGENVMRIYSKSFKADYALPEWISPEAKNLISNLLVVDPEKRYSIPDIMKDPWFQIGFLRPIAFSMKESAMEDNINFNEDDDGNSSGSNNDDAELVGAKPARPSYNAFEIISSLSHGFDLRNLFETRKRSPSMFISKFSASAVLGKLEAVAKKLNFRVTGKKEFMVRMQGAEEGRKGKLAMTVEVFEVAPEVAVVEFSKSAGDTLEYIKFCEDQVRPSLKDIVWSWQGDNSCPQ 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi63g00066 457 SUPERFAMILY Protein kinase-like (PK-like) 16 278 IPR011009 -
Sebi63g00066 457 ProSiteProfiles Protein kinase domain profile. 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi63g00066 457 Pfam NAF domain 327 382 IPR004041 GO:0007165
Sebi63g00066 457 FunFam Aurora kinase A 12 106 - -
Sebi63g00066 457 SMART serkin_6 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi63g00066 457 Coils Coil 51 71 - -
Sebi63g00066 457 FunFam Non-specific serine/threonine protein kinase 13 317 - -
Sebi63g00066 457 ProSiteProfiles NAF domain profile. 323 348 IPR018451 GO:0007165
Sebi63g00066 457 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 4 443 - -
Sebi63g00066 457 CDD CIPK_C 329 443 - -
Sebi63g00066 457 Gene3D Transferase(Phosphotransferase) domain 1 11 329 - -
Sebi63g00066 457 Gene3D Kinase associated domain 1, KA1 330 448 - -
Sebi63g00066 457 ProSitePatterns Protein kinases ATP-binding region signature. 26 53 IPR017441 GO:0005524
Sebi63g00066 457 MobiDBLite consensus disorder prediction 298 319 - -
Sebi63g00066 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Sebi63g00066 457 Pfam Protein kinase domain 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi63g00066 457 FunFam Non-specific serine/threonine protein kinase 324 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi63g00066 Sebi-Chr63 2211311 2212684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi63g00066 1 453 CBL-interacting serine-threonine protein kinases AT5G25110 60.265 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sebi63g00066 Pkinase 2.2e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi63g00066 - - gmx:100804244 764.992