Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi63g00058 ATGGCCATATCTGTGGCTGGGTTTGTTGAAGTGAATAAATGGATATCAACATTGATTGCAAGTGCCACTGAGCAAATGATGAAGGAGAAGGATGAAAGAATTCGTAGGACTGGAGAACTTTTGGCTTATATTCGTACTTTGAAGATGTATGGATGGGAACTTCTGTTTTCTAGTTGGTTAATGGAGACAAGATCTTTGGAAGTGAAACACTTAGCTACTCGGAAGTACTTGGATGCATGGTGTGTATTCTTTTGGGCTACAACACCAACACTCTTTTCTCTTTTCACATTTGGACTTTTTGCATTGATGGGACATCAACTTGATGCTGCAATGGTTTTCACTTGTCTTGCTTTGTTTAACACACTGATTTCACCACTGAATTCATTTCCTTGGGTGATTAATGGTTTGATTGATGCATTCATATCCTCCAGACGGTTGAGTAGGTTTCTCTCTTGTCCTGAACATGAATTCAAAGTGGGAGAGAGCAGTTCCTGTTCATCACCATACCTGAGTAAACAGCCTGATTCTTCACAAGATGTGGCTGTATTTGTCCAAGATGCATGTTGTACTTGGTCGAGCAGTGATGAACAAGCATTAAATTTAGTGTTGAATCATGTGAATCTAAGCCTGTCCAAGGGTTCCTTTGTTGCAGTTATTGGAGAGGTTGGTTCAGGTAAATCATCCCTGTTATATTCAATTCTTGGAGAAATGCGGCTTGCTCATGGATCTATTTATTCCAACAGATCCGTAGCTTATGTACCACAGGTCCCCTGGATTTTATCTGGAACAGTGCGTGACAATATATTATTTGGGAAAAGCTATGATCCTCAAAGGTATTCAGATACACTGCAGGCATGCGCATTAGATGTTGATATCTCACTGATGGTTGGAGGTGACATGGCTTATATTGGAGAGAAAGGAGTCAACTTATCAGGTGGACAGAGAGCTCGTCTTGCTTTGGCAAGGGCACTCTATCATGGCTCAGATGTTATTATGCTTGATGATGTCCTGAGTGCAGTTGATGCACAAGTTGCTCAATGGATCCTACACAATGCCATTTTAGGTCCTCTTATGCAGGGAAAAACTCGATTGCTCTGTACCCACAACATTCAGGCAATGTCTTCTGCTGATATGATTATTGTATTGGACAAAGGACACATAAAGTGGATGGGAAATTCAGCTGAGTTTCTAATTTCTTCATATACAGGATTCTCCCCATTGAATGAAATTGATTCAACTTTAAATAGTCATGGACAATCTTGTAGCACCAATTCTTCTCCCAAATCAAAGGAGCAGTCTCTGATTATGCATGCTACCGAGGTTATAGAGGAGGTAATTGAAGTTGAGTTGAGGAAAGAGGGAAAGGTCGAAGTTGGAGTGTATAAGAATTATGCTGTCTTCACTGGCTGGTTCATCACAGTTGTTATATGTCTATCAGCTATTCTGATGCAAGCTTCTCGTAATGGAAATGATTTATGGCTGTCATATTGGGTTGATACAACAATAGACAGCAGTCAAACAAGATACTCTGTGTCTTTCTATCTGGCTATACTATGTCTCTTTTGTATTATGAATTCCTTTTTCACATTGGTGAGGGCATTCTCTTTTGCATTTGGTGGCTTACAAGCAGCAACTAAGGTACACAATAGACTTCTTAGCAAGCTTATCGATGCACCTGTGCAATTCTTTGATCAGACCCCGGGTGGAAGAATATTGAATAGGTTATCTTCAGATCTTTATACAATTGATGATTCTCTTCCATTCATTATGAACATTCTCCTAGCTAATTTTGTAGGCCTGTTGGGTATTGCAATAATTTTGTCTTATGTACAGGTCTTCTTCTTAGTCCTGTTATTGCCATTTTGGTATATCTACAGTAGACTTCAGTTCTTTTACAGGTCAACATCTAGAGAATTACGAAGACTGGATAGTGTTTCACGTTCTCCAATATATACGTCTTTCACAGAAACACTTGATGGGTCAGCAACTATTAGGGCGTTTAAATCTGAGGACTTTTTCTTTGCCAAATTCACTGAACATGTAACATTGTATCAGAAGACTTCTTATACAGAGATAGTGGCAAGTCTGTGGCTTTCCTTGCGTCTTCAATTATTAGCTGCATTTATCATCTCATTCATAGCCCTTATGGCTGTTGTCGGATCTCATGGCAGTCTGCCTATCAACTTCGGTACCCCAGGACTGGTTGGATTGGCCCTCTCTTATGCAGCTCCAATTGTGTCCCTGTTGGGGAGTTTTTTGACAAGTTTTACTGAAACAGAGAAGGAAATGGTTTCAGTTGAAAGAGCCCTTCAATACATGGACATTCCTCAAGAAGAACAAGCTGGATGCCTATACTTAAATCCAGATTGGCCAAATCAAGGAGTTATTGAATTCCAGCATGTTACTTTGAAATACATGCCATTTTTGCCAGCTGCACTCAGCAATCTTACTTTTAGAATTGCAGGAGGGACACAGATTGGAATAATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTAAATGCCCTTTTCCGCCTTACCCCAATATGTACAGGCTCAATCACAGTTGACGGCATGGACATTAAAAATATTCCTGTCAGAGAACTACGTACACACTTGGCTATTGTTCCTCAGAGTCCATTCTTGTTTGAAGGATCATTAAGGGATAACCTAGATCCATTCAAAATGCATGATGACTTCAAAATTTGGAATGCATTGGAGAAGTGCCATGTGAAAGAGGAAGTAGAAGTAGCTGGAGGGCTGGATATTCTTGTAAAGGAAGCGGGGATGTCATTTTCAGTTGGCCAGCGGCAGCTTCTTTGCCTTGCACGTGCACTTCTCAAATCTTCAAAGGTTCTCTGTTTGGATGAGTGTACGGCCAGTGTAGACATTCAAACTGCTTCACTGCTGCAAAGTACAATATCTAGTGAATGCGAAGGAATGACAGTGATCACAATTGCTCACCGGATTTCAACTGTTATAAATATGGATAACATTCTGATTCTTGACCACGGGAAACTGGCTGAACAAGGAAATCCGCAGATTCTTCTGAAAGATGACACGTCTATATTTTCTAGTTTTGTTAAAGCTTCATCAATGTAA 3102 0.4023 MAISVAGFVEVNKWISTLIASATEQMMKEKDERIRRTGELLAYIRTLKMYGWELLFSSWLMETRSLEVKHLATRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAFISSRRLSRFLSCPEHEFKVGESSSCSSPYLSKQPDSSQDVAVFVQDACCTWSSSDEQALNLVLNHVNLSLSKGSFVAVIGEVGSGKSSLLYSILGEMRLAHGSIYSNRSVAYVPQVPWILSGTVRDNILFGKSYDPQRYSDTLQACALDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARALYHGSDVIMLDDVLSAVDAQVAQWILHNAILGPLMQGKTRLLCTHNIQAMSSADMIIVLDKGHIKWMGNSAEFLISSYTGFSPLNEIDSTLNSHGQSCSTNSSPKSKEQSLIMHATEVIEEVIEVELRKEGKVEVGVYKNYAVFTGWFITVVICLSAILMQASRNGNDLWLSYWVDTTIDSSQTRYSVSFYLAILCLFCIMNSFFTLVRAFSFAFGGLQAATKVHNRLLSKLIDAPVQFFDQTPGGRILNRLSSDLYTIDDSLPFIMNILLANFVGLLGIAIILSYVQVFFLVLLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSATIRAFKSEDFFFAKFTEHVTLYQKTSYTEIVASLWLSLRLQLLAAFIISFIALMAVVGSHGSLPINFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSVERALQYMDIPQEEQAGCLYLNPDWPNQGVIEFQHVTLKYMPFLPAALSNLTFRIAGGTQIGIIGRTGAGKSSVLNALFRLTPICTGSITVDGMDIKNIPVRELRTHLAIVPQSPFLFEGSLRDNLDPFKMHDDFKIWNALEKCHVKEEVEVAGGLDILVKEAGMSFSVGQRQLLCLARALLKSSKVLCLDECTASVDIQTASLLQSTISSECEGMTVITIAHRISTVINMDNILILDHGKLAEQGNPQILLKDDTSIFSSFVKASSM 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi63g00058 1033 CDD ABCC_MRP_domain2 794 1013 - -
Sebi63g00058 1033 Pfam ABC transporter 813 960 IPR003439 GO:0005524
Sebi63g00058 1033 FunFam ABC transporter C family member 5 438 779 - -
Sebi63g00058 1033 Gene3D ABC transporter type 1, transmembrane domain 443 780 IPR036640 GO:0005524|GO:0016020
Sebi63g00058 1033 ProSitePatterns ABC transporters family signature. 932 946 IPR017871 GO:0005524|GO:0016887
Sebi63g00058 1033 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 796 1029 IPR003439 GO:0005524
Sebi63g00058 1033 SUPERFAMILY ABC transporter transmembrane region 5 156 IPR036640 GO:0005524|GO:0016020
Sebi63g00058 1033 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 474 761 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi63g00058 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 790 1021 IPR027417 -
Sebi63g00058 1033 FunFam ATP-binding cassette (ABC) transporter, putative 783 1030 - -
Sebi63g00058 1033 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 138 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi63g00058 1033 Gene3D - 783 1031 IPR027417 -
Sebi63g00058 1033 Pfam ABC transporter transmembrane region 11 126 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi63g00058 1033 Pfam ABC transporter transmembrane region 475 723 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Sebi63g00058 1033 Pfam ABC transporter 203 335 IPR003439 GO:0005524
Sebi63g00058 1033 ProSitePatterns ABC transporters family signature. 310 324 IPR017871 GO:0005524|GO:0016887
Sebi63g00058 1033 Gene3D - 163 416 IPR027417 -
Sebi63g00058 1033 CDD ABC_6TM_MRP7_D2_like 473 773 - -
Sebi63g00058 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 397 IPR027417 -
Sebi63g00058 1033 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 8 1031 - -
Sebi63g00058 1033 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 182 409 IPR003439 GO:0005524
Sebi63g00058 1033 Gene3D ABC transporter type 1, transmembrane domain 1 155 IPR036640 GO:0005524|GO:0016020
Sebi63g00058 1033 CDD ABCC_MRP_domain1 184 385 - -
Sebi63g00058 1033 SUPERFAMILY ABC transporter transmembrane region 470 778 IPR036640 GO:0005524|GO:0016020
Sebi63g00058 1033 SMART AAA_5 822 1006 IPR003593 GO:0016887
Sebi63g00058 1033 SMART AAA_5 212 386 IPR003593 GO:0016887
Sebi63g00058 1033 FunFam ABC transporter C family member 13 165 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi63g00058 Sebi-Chr63 1911295 1926450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi63g00058 202 434 Calmodulin-binding Proteins AT2G36910 25.600 8.67e-18 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi63g00058 K05674 - gmx:100814181 1775.37