Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi63g00024 ATGGCAATTGAGAGCGATCAACAACAAAAAGATTTCATTTTCAGGTCTAAGCTCCAAGAAATCTACATCCCCAAACACCTTCCCCTGCATTCTTATTGCTTTGAGAATCTCTCTGAGTTTGGTTCACACCCTTGTTTGATCAATGCCCCAAATGGGGTTATCTATACCTATTCCGATGTGGAACTCACAGCTCGAAAAGTTGCCTCAGGACTCAACAAATTGGGTGTCCAAAAGGAGGTGCCATGGCCACTGCCGCAAACCCATTTTTTCACACCTTCTGAGATTGCAAAACAAGCAAAAGCCTCAAATGCAAAATTGCTCATAACACAAGCGAGTTACTATGAGAAAGTGAAGGATTTGGATGTGAAGTTGGTGTTTGTGGACTCTCCCCCAGAAGGGCATTTGCATTTCTCTGAATTGAGTGAATCAGATGAGAATGAATTGCCAGAAGTGAAAATTGAGCCTAATGATGTGGTGGCACTGCCCTATTCATCTGGGACAACGGGTCTTCCAAAAGGGGTGATGTTAACACATAAAGGCCTTAGAGCCAAAGCTACCATTTTGCTCATGCCCAAGTTTGATATCAATGCCTTGTTGGCACTTATTCACAAACACAGGATCACAATTGCACCTGTTGTCCCACCAATTGTTTTGGCAATTGCCAAGTCACCAGATCTTCATAAGTATGACCTATCTTCTATTAGGGTCTTGAAATCTGGCGGTGCTCCTCTTGGTAAAGAACTTGAAGACACTCTTAGGGCCAAATTCCCCAATGCCAAACTTGGTCAGGGATATGGAATGACTGAGGCAGGACCAGTTCTAACAATGTCCTTAGCATTTGCTAAAGAACCAATGGATGTAAAACCAGGTGCATGTGGAACAGTTGTGAGAAATGCAGAGATGAAGATTGTGGACCCTGAAACTGGCAATTCTTTACCTCGAAACCAGCCCGGTGAAATATGCATTAGAGGAGACCAGATCATGAAAGGTTATCTAAATGATCCAGAGGCTACAAAGAGAACCATAGACAAAGAGGGTTGGTTACATACAGGTGACATTGGTTATATCGACGATGATGATGAATTATTCATCGTTGATAGGTTGAAAGAATTGATCAAATACAAAGGATTTCAAGTGGCTCCAGCTGAACTTGAAGCCCTTCTTCTCTCTCATCCTAAGATCTCTGATGCTGCTGTGGTTCCAATGAAGGATGAAGCAGCTGGAGAAGTACCTGTTGCATTTGTGGTGAGATCAAATGGTCACACTGATGTAACCGAGGATGAAATTAAGCAGTTTATCTCCAAACAGGTGGTGTTTTACAAAAGAATAAACCGAGTATTCTTCATTGATGCAATTCCCAAGTCACCGTCAGGGAAAATCTTGCGTAAGGATCTGAGAGCAAAGTTAGCAGCAGGTGTACCAAATTCAAATTAA 1434 0.424 MAIESDQQQKDFIFRSKLQEIYIPKHLPLHSYCFENLSEFGSHPCLINAPNGVIYTYSDVELTARKVASGLNKLGVQKEVPWPLPQTHFFTPSEIAKQAKASNAKLLITQASYYEKVKDLDVKLVFVDSPPEGHLHFSELSESDENELPEVKIEPNDVVALPYSSGTTGLPKGVMLTHKGLRAKATILLMPKFDINALLALIHKHRITIAPVVPPIVLAIAKSPDLHKYDLSSIRVLKSGGAPLGKELEDTLRAKFPNAKLGQGYGMTEAGPVLTMSLAFAKEPMDVKPGACGTVVRNAEMKIVDPETGNSLPRNQPGEICIRGDQIMKGYLNDPEATKRTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLLSHPKISDAAVVPMKDEAAGEVPVAFVVRSNGHTDVTEDEIKQFISKQVVFYKRINRVFFIDAIPKSPSGKILRKDLRAKLAAGVPNSN 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi63g00024 477 Gene3D - 3 182 IPR042099 -
Sebi63g00024 477 SUPERFAMILY Acetyl-CoA synthetase-like 15 471 - -
Sebi63g00024 477 ProSitePatterns Putative AMP-binding domain signature. 161 172 IPR020845 -
Sebi63g00024 477 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 180 467 - -
Sebi63g00024 477 FunFam 4-coumarate--CoA ligase 2 370 472 - -
Sebi63g00024 477 Pfam AMP-binding enzyme 185 374 IPR000873 -
Sebi63g00024 477 Gene3D - 183 369 IPR042099 -
Sebi63g00024 477 Pfam AMP-binding enzyme C-terminal domain 383 459 IPR025110 -
Sebi63g00024 477 CDD 4CL 23 465 - -
Sebi63g00024 477 Gene3D - 370 471 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi63g00024 Sebi-Chr63 580519 585302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi63g00024 1 437 Monolignol Biosynthesis Gene Families AT1G51680 59.612 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi63g00024 K01904 - qsa:O6P43_027979 748.429