Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi63g00022 ATGGGTTCTGTGTCTGGAGAGGAGAAGATGGACCTCGATTTTGATGAGGAGATTCCCTTAAGCGCCACATCATCTGCCTCTAAAGTACATCCTTTCAGTTTCGAGCCAAGAGTTGCTTTGCCCAAATCATCCATCTTAAACCTCTTAAGGACAAGACGAATCAGCAGGAGTATATATGTTGTATTAATTAAAGCCAAGATCAACGCCTTGCTACCTTTTGGTCCATTGGCCATATTGCTACATTACCTAACGGGAAAACATGGATGGGTGTTCTTCTTCACATTATTAGGTATTACTCCTTTGGCAGAACGTCTGGGTTATGCTACTGAGCAGCTTGCGTTCTACACAGGACCGACAGTTGGGGGTCTACTCAATGCCACGTTTGGAAATGCTACTGAAATGATTATATCAATTTATGCATTAAAAAGCGATATGATTAGGGTTGTTCAACAGTCTTTACTTGGCTCAATATTATCAAATATGCTTCTAGTTCTTGGGTGTGCATTCTTTACTGGTGGGATTGTCCACCACCAAAAAATTCAGGTTTTCAATAAGGCAGCTGCTGTTGTCAATTCTGGGTTGCTGTTGATGGCTGTAATGGGAATATTATTTCCTGCTGTTCTTCACTTTACTCATTCAGAGGTTCATCTTGGGAAGTCAGTGTTATCTCTATCAAGATTTAGCAGCTGTATAATGCTAGTGGCATATGCAAGCTACCTTTTCTTTCAACTTAAAAGTCAGCAAAATTCTTATAGTCCAGTTAATGAGGAAGGAGATACAAGTGAAAATTCTGACGAGGAGGAAGAAATTGAATTAACCCAATGGGAAGCGATAATCTGGCTTGCTATTTTGACAGCATGGGTATCTGTATTGTCTGGATACCTTGTGGATGCCATAGAGGGAGCATCTGAGTCATTGAATATGTCAGTGGCTTTTATTAGTGTCATCTTGCTTCCAATTGTAGGAAATGCTGCAGAGCATGCAAGTGCTATCATGTTTGCTGTGAAGGACAAGCTTGATATCACAATTGGAGTTGCTGTTGGATCGTCTACACAGATATCTATGTTTGTGATCCCCTTCTGTGTGGTTGTTGGATGGTGCATGGGAAAAGAAATGGACTTGAATTTTCAACTCTTTGAGACTGCCACACTTTTTATCACTGTGCTGGTAGTTGCATTTATGATGCAGGAAGGAACCTCAAATTATTTTAAAGGCTTGATGCTTATTCTGTGCTATCTTATAGTTGCTGCCAGTTTTTTCGTACATGTAGACCCTAAAAGTGAACTCACTGCTGGTCCATCGCATCGTGGGAAAGGAGAAGGTGTGAGGAAGACAAAGGTGTAG 1344 0.4092 MGSVSGEEKMDLDFDEEIPLSATSSASKVHPFSFEPRVALPKSSILNLLRTRRISRSIYVVLIKAKINALLPFGPLAILLHYLTGKHGWVFFFTLLGITPLAERLGYATEQLAFYTGPTVGGLLNATFGNATEMIISIYALKSDMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHHQKIQVFNKAAAVVNSGLLLMAVMGILFPAVLHFTHSEVHLGKSVLSLSRFSSCIMLVAYASYLFFQLKSQQNSYSPVNEEGDTSENSDEEEEIELTQWEAIIWLAILTAWVSVLSGYLVDAIEGASESLNMSVAFISVILLPIVGNAAEHASAIMFAVKDKLDITIGVAVGSSTQISMFVIPFCVVVGWCMGKEMDLNFQLFETATLFITVLVVAFMMQEGTSNYFKGLMLILCYLIVAASFFVHVDPKSELTAGPSHRGKGEGVRKTKV 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi63g00022 447 NCBIfam calcium/proton exchanger 70 420 IPR004798 GO:0006816|GO:0015369
Sebi63g00022 447 FunFam Vacuolar cation/proton exchanger 265 421 - -
Sebi63g00022 447 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 50 425 IPR004713 GO:0006812|GO:0008324|GO:0016020
Sebi63g00022 447 NCBIfam calcium/proton exchanger 59 420 - -
Sebi63g00022 447 FunFam Vacuolar cation/proton exchanger 118 257 - -
Sebi63g00022 447 Pfam Sodium/calcium exchanger protein 278 417 IPR004837 GO:0016020|GO:0055085
Sebi63g00022 447 Pfam Sodium/calcium exchanger protein 89 244 IPR004837 GO:0016020|GO:0055085
Sebi63g00022 447 Gene3D - 264 421 IPR044880 -
Sebi63g00022 447 Gene3D - 118 256 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi63g00022 Sebi-Chr63 535273 545644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi63g00022 41 428 Antiporters AT3G13320 74.807 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi63g00022 K07300 - gmx:100806000 696.427