Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi63g00012 ATGAACAACCATTGCCATTTCTACAATTTGGGGGGCACTGAGGTTGGGAATCTGATGGGAGATTCTTGGTTAAGAGCACATGAACAGTACAAGGACTACTATGCAGCACTTTATTTGAAGAACAGCTGGGAAAAACTTCTACCTATTCTCAAAGTTCAGAAAGATTTACTTTCATCCTCCGTGACTAGCCAAGATTTGGTCCAGAGACTAAAGGCTTTCAATCTAGCTTTTGATGAAAGTATAAGAAGCAATCCAATTGGGCAATCATTGATGAGTCATGAGGGAAAATATATGCAAGCATTTGGTGGAAGGCATTGTACCAACTATAAGCCTATGTGA 339 0.3982 MNNHCHFYNLGGTEVGNLMGDSWLRAHEQYKDYYAALYLKNSWEKLLPILKVQKDLLSSSVTSQDLVQRLKAFNLAFDESIRSNPIGQSLMSHEGKYMQAFGGRHCTNYKPM 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi63g00012 112 Gene3D Exocyst complex component Exo70 1 84 - -
Sebi63g00012 112 SUPERFAMILY Cullin repeat-like 1 82 IPR016159 -
Sebi63g00012 112 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 83 IPR004140 GO:0000145|GO:0006887
Sebi63g00012 112 Pfam Exo70 exocyst complex subunit 1 82 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi63g00012 Sebi-Chr63 267663 268001 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi63g00012 1 79 EXO70 exocyst subunit family AT4G31540 54.217 1.37e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi63g00012 K07195 - gmx:100777662 131.339