Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi637g00025 ATGTCTCAAATCAAAGATGTGACAATAAGCCCTCAAACTTTCTTCAAAATGCACAAGCTAAGGCTTTTGAAATTTTATATGACCTCATGCGATAAGAGAAGCAATGTACATATTTCCAGAGGTCTAGAATGTATGCCTGATGAATTAAGCTATCTCCGATGGGACTGTTTTCCATTGAAATCCTTGCCACCATCGTTTTCTGTAGAGAAGCTGGTTGAACTTGATCTAAAACATAGCCTCGTTGAAAAACTATGGGACGGAATGCAGGATCTTCTGAATTTGAAGTCATTGTACCTTGGTGGTTGCAAGCGCCTGACTGAGCTCCCAGATTTCTCTATGGCCTCAAAACTTGAAGAAGTACATCTTGATGATTGTACAAGTTTGTTGAATGTTCCTTCATCCATTTTGTCACTTGATAGTCTTTTTGCACTGAATCTGACAGGCTGTAAACAGCTTCGTAACATTCAAAGTGAGAAGCAATCTCGATCTCTTCGATGGTTTAATCTGAGGGGGTGCTCAAGACTTGTAAAGTATTCTTTTTCTTCAGAGAAATTGGAGTACCTGATCTTAGATGGCACTGCAATTGAAGAACTGCCCTCATCAGTTGGACAACTCAAGGACTTTTCTAGCATGTATCCCCAGAATCTTCCAAATATCCTCTATGAGAATGGTTCAGAATCTTCAGATTGTTCCGTTCAGCTTCTTGACTACCCAAAACTTGAGAAGTTACCTGCAATATTTGACACCTCACTGTCTATTACAACTCTCTGTCTGGATAATTGTTTAAATTTATCAAAACTCCCTGACAACCTTGGCCTCTTATCAAAATTAAACAAACTTTCATTAAGAGGAAGCAATATTGAGAACTTTCCTGGTAGCATAAAAGATCTTTCTCAGTTGAGAGTTCTCAATGTAAGCAACTGCAGGAGGCTTCGTTCCTTGCCAGAGCTCCCATTCTTGTTACAGGACTTGAATGCAAGTAATTGCATTTCCCTAGAAACAGTATCAAATTTAGGGATCACGATGTTGCAAGATTCTTTTGGTAGACTGAAGAAGAGCTCATTGCTCAGACAGATTCAAGAGGAAGAAAAAATGTATATTCGTAATCGTGACTATTTGGGAAGATTTGAATTTCATAATTGCATAAAGTTGGACCAGATTTCATGCAAGACTGTTATGGAAGAAACACTAATTAGAATTCAGCTAGCTGCCTACCTATCAACATTGATTGAAGAATGTTATGATCCTTATTGTCAAGCTGATGAAGTTTCTAGAAACTTTGACCCTGAAGATTTTACATATATTTCCCGTCCAGTTTATATTATTTTGCCGGGAAATGAAGTGCCAAATTGGTTCATGCATAAAGGAACAGACTCCCCAATCATAACTCTAGAACTTTCTCCACGGTGGCATCGTTATTTCAATTACCTGGGCTTTGCTTTCTGCCTTGTTCTAGGACCACCATCCCACTCAAATAGGAAGAAAAACCATCACATTGGTTTTGTGGCAGGGTGTAGATACTATTTTGAAGGCAAATATGCTGGAACTTGCATTATAAAGTCGTCCTGCAATGATGCTGAATCAGATCAGGTATGGCTTTGGTACGATAAATTGTTAAAAGCTGAAGAGGAAACAAGCAATATTGCTTCATATAAGATGCAGGTCTCATTTGAATTTTTTGTAAGGCCTCGCAGTTCAGGACTTGTTGTGAAACAATGCGGAATTCGACCATTATATGCTCCATATGACATCATGCAAAACTCAAATGAAGAAGACGGAAAAAGAGAAAGTAAGATACCTTATGTTGAGTCTGAAGTCAACTCAATGCTAAGGAATTATGTGCTGTTTCGCGAGTATGGTCATCCTCCCGACGGCCTTAGATTGCCATCACAACAAGAAACAATTTCTGGGTATCCTGATCGACATGTTGGGGAATCCTTTCTGTTAATTCATTGTGCCAAGAGTGTTGATGTACTTAGAATGGAACACAAGTGCTTGAGTATTGGAGCTGAAGTATTTGTGTATTTTGGCCGTGTTGGTAGTCACCACCTACGTGGTGTGTCCACACAACGTGCTCTGCGGTATTTAGCACAACTGCTTATGGATGACTATTGTAATTTTGGTAAACTCCTAGACAACATCAACTTCTTTTCATCGCTAAGGAGATTGTCTCTAAATGGTTGCAATGTTGAGACCCTGCCTGCTAGCATCGAGCATCTTTCAAGGCTGGAACATCTTTTATTAAATGAATGTAAGAGGCTTAGGTCTCTCCCGAAGCTTCCGAGGTCCCTTCAATATTTATTTGTCCAGAAGTGCACATCTCTGGAAACAGTTGAATTGGCTAAGAGCAAGAGGATGGAAGTTCATGGAAAATTTCCCAATGAAATGGCAGGTATGGTATTCGAAAAAGTATCGAGAATACAAATTACTGACCCAGGAAGAAGGGTTGCAGACTGGTCCATGCAAAGGTTAACACGAGATTTGATGGCCATTGAATTCTATGTTGCTTCATGTACTGAGCCATTGAGTGTCGGGTGTGAAAGCGGTACATTGAAAGTTAACATCACGTGA 2571 0.396 MSQIKDVTISPQTFFKMHKLRLLKFYMTSCDKRSNVHISRGLECMPDELSYLRWDCFPLKSLPPSFSVEKLVELDLKHSLVEKLWDGMQDLLNLKSLYLGGCKRLTELPDFSMASKLEEVHLDDCTSLLNVPSSILSLDSLFALNLTGCKQLRNIQSEKQSRSLRWFNLRGCSRLVKYSFSSEKLEYLILDGTAIEELPSSVGQLKDFSSMYPQNLPNILYENGSESSDCSVQLLDYPKLEKLPAIFDTSLSITTLCLDNCLNLSKLPDNLGLLSKLNKLSLRGSNIENFPGSIKDLSQLRVLNVSNCRRLRSLPELPFLLQDLNASNCISLETVSNLGITMLQDSFGRLKKSSLLRQIQEEEKMYIRNRDYLGRFEFHNCIKLDQISCKTVMEETLIRIQLAAYLSTLIEECYDPYCQADEVSRNFDPEDFTYISRPVYIILPGNEVPNWFMHKGTDSPIITLELSPRWHRYFNYLGFAFCLVLGPPSHSNRKKNHHIGFVAGCRYYFEGKYAGTCIIKSSCNDAESDQVWLWYDKLLKAEEETSNIASYKMQVSFEFFVRPRSSGLVVKQCGIRPLYAPYDIMQNSNEEDGKRESKIPYVESEVNSMLRNYVLFREYGHPPDGLRLPSQQETISGYPDRHVGESFLLIHCAKSVDVLRMEHKCLSIGAEVFVYFGRVGSHHLRGVSTQRALRYLAQLLMDDYCNFGKLLDNINFFSSLRRLSLNGCNVETLPASIEHLSRLEHLLLNECKRLRSLPKLPRSLQYLFVQKCTSLETVELAKSKRMEVHGKFPNEMAGMVFEKVSRIQITDPGRRVADWSMQRLTRDLMAIEFYVASCTEPLSVGCESGTLKVNIT 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi637g00025 856 SUPERFAMILY L domain-like 684 779 - -
Sebi637g00025 856 Gene3D Ribonuclease Inhibitor 226 372 IPR032675 -
Sebi637g00025 856 Gene3D Ribonuclease Inhibitor 1 221 IPR032675 -
Sebi637g00025 856 Gene3D Ribonuclease Inhibitor 669 803 IPR032675 -
Sebi637g00025 856 SUPERFAMILY L domain-like 7 338 - -
Sebi637g00025 856 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 163 350 - -
Sebi637g00025 856 Pfam C-JID domain 443 580 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi637g00025 Sebi-Chr637 554386 557050 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi637g00025 10 310 WRKY Transcription Factor Family AT4G12020 34.951 4.66e-35 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi637g00025 - - tpra:123891409 963.755