Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi637g00022 ATGTACAAGCTGAGGCTTTTGAATTTTTATATGCCCTCAAGCGATAAGAGAAGCAACGTACATATTTCTAGAGGCCTCGAAAGTATGCCTGATGAATTAAGTTATCTCCGTTGGGACTGCTTTCCATTGACATCCTTGCCACCGTCATTTTGTGCGGAGAAACTTGTTGAACTTGATCTAAAACATAGTCTCATTGAAAGACTTTGGGATGGAAAGCAGGATCTTGTAAATTTGAAGTCATTATACCTTTGTGGTAGCAAGCACCTGATTGAGCTCCCAGATTTCTCTATGGCCTCAAAACTTGAAGAAGTACATCTTGATGATTGTACAAAAGACACCGCAATTGAAGAACTGCCCTCATCAGTTGGACAACTCAAGGACTTCTCTAGCATTTGTCTTGATCATTGTAAAAGACTTCAGAATCTTCCAAATACCTTCTATGAGAGTGGTTTAGATTGTTCCATTCAGCTTCTTGACTGCCCAAAACCCAAGAAATTGCGTCCAACACTTGACACCCTCATTGTCCATTACCACTCTCTCTCTGGACAATTGAGGCTTCGTTCCTTGCCAGAGCTCTCATTCTTGTTACAAGACTTGAATGCAAGTAATTGTGTTTCCCTAGAATCAGTATCAAATTTAGGGATCACAATGTTGCAAGATTCTTTTGGTAGACTGAAGAAGAGTTCATTGCTCAGACAGGTTCAAGAGGAAGAAAAAATGTCTCTTCGTAATCGTGGCTATTTGGGAAGATTTGAGTTTCATAATTGCATAAAGTTGGATCAGATTGCATGCAAGACTGTTATGGTGGAGGCGCTAATTAGAATTCAGCTAGCAGCCTACCTGTCATCAATGATTGATGAATGTCATGATCCTTATTGTCAAACTGATGAAGTTCCTAAGAATTTTGACCCTGATGATCTTGTATATATTTCCCGTCCAGTTTATATTGTTTTGCCGGGAAATGAAGTGCCAAATTGGTTCATTCATAAAAGAAGAGACTCCTCAATCACTTTAGAACTTTTTGCACCGTGGCATTGTTGTTGCAATTACCTGGGCTTAGCTTTCTGCCTTGTTCTAGGACCATCCCACTCAAATAGGAAGAAAAATCAGCATATTGGTTTTGTGGCAGAGTGTAGATACTATTTTGAAGGCAAATATGCTGGAACTTGCATGATAATGTCTTCTTGTAATGATGCTGAATCAGATCAGGTTTGGCTTTGGTTTGATAAATTGTTAGGAATGACAGAGAAAACAGACAGATTTTCTCTATATGGGGGGGAGGTCTCCTTTGAATTTTTTGTAAGGCCTTGCAGTTCAGGACTTGTTGTGAAACAATGTGGAATTCGACCATTATATGCTCCGCATGACATCATGCAAAGCTCAAATGAACTAGAAGGTAAGAGACCTTACGCGGAGTTTGAATACTATAAAGATCAAAGGAATTATGAGCTTCTCCGCCTATATGCTCATCCTCCTGGAGGCCTTGGATTTCCATCAGAAAAACAAAGTATTTCTGGGTATCACGATGGACATCGTGGGAAATCCTTTCCATCAACTTATTGTGCCAATGATGTTGATGAAATTACTCTGCAACATGTCCACTGGAGTAATGTAGCAGAAGTGCGTGTTTATTTTGTCGTTGCTGGTTGCCATCATCAACGTGATGAGTCTATGTCACGTGCTCTACGCTATTTAGCACAGTTGCTTCTGGATGACTATTGCAATTTCGGTAAACTCCTAGACAATATCAACGTCTTTTCGTCGCTAAGGAGTTTGCAGTTAAATGGCTGGAACGTTGAGAGCTTGCCTGCTAGCATCGAGCATCTTTCAAGGCTGGAATTTCTTTCATTATTTGACTGCAAGAGGCTTCGGTCTCTCCCAAAGCTTCCACCTTCCATTCTAGATTTATATGCCTCCCAGTGCACATCTCTGGAGACAGTTGAATTAGCTAAGGAAGACAAGGTACGAGTTCAAGTTCATGGAGATTCACCCAATATAATAAAAGGTATGGCATATGAAAATGTATCGAGAATACAACTCACTGACCCAGGAGGAAGGGTTACAAAGTGGATCATGCGAAGGTTAGCAGAGGATTCGATGGCCATTTTCTATGTTGCTCCATATACCGAGTCATGGAATGTCATGTGTGAAAGTGACTTTATCCAATCGCTAGATCAAAGAATCTGGGGTATGTTCCCGGTCAAACCAAGAGGCATTGGAACAAGGAAGTTAGAATTGGGTTGGGAAGCTCCGATAATTGCTCTTGGTCGTGTTCCCAGGAATATCTCTGATGTTGATTTGCTTCCCTTAGGTAAATTGGCTGTCTTATGCATAATTTTGGCTTCAAGACAGGAAGACTGA 2361 0.4075 MYKLRLLNFYMPSSDKRSNVHISRGLESMPDELSYLRWDCFPLTSLPPSFCAEKLVELDLKHSLIERLWDGKQDLVNLKSLYLCGSKHLIELPDFSMASKLEEVHLDDCTKDTAIEELPSSVGQLKDFSSICLDHCKRLQNLPNTFYESGLDCSIQLLDCPKPKKLRPTLDTLIVHYHSLSGQLRLRSLPELSFLLQDLNASNCVSLESVSNLGITMLQDSFGRLKKSSLLRQVQEEEKMSLRNRGYLGRFEFHNCIKLDQIACKTVMVEALIRIQLAAYLSSMIDECHDPYCQTDEVPKNFDPDDLVYISRPVYIVLPGNEVPNWFIHKRRDSSITLELFAPWHCCCNYLGLAFCLVLGPSHSNRKKNQHIGFVAECRYYFEGKYAGTCMIMSSCNDAESDQVWLWFDKLLGMTEKTDRFSLYGGEVSFEFFVRPCSSGLVVKQCGIRPLYAPHDIMQSSNELEGKRPYAEFEYYKDQRNYELLRLYAHPPGGLGFPSEKQSISGYHDGHRGKSFPSTYCANDVDEITLQHVHWSNVAEVRVYFVVAGCHHQRDESMSRALRYLAQLLLDDYCNFGKLLDNINVFSSLRSLQLNGWNVESLPASIEHLSRLEFLSLFDCKRLRSLPKLPPSILDLYASQCTSLETVELAKEDKVRVQVHGDSPNIIKGMAYENVSRIQLTDPGGRVTKWIMRRLAEDSMAIFYVAPYTESWNVMCESDFIQSLDQRIWGMFPVKPRGIGTRKLELGWEAPIIALGRVPRNISDVDLLPLGKLAVLCIILASRQED 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi637g00022 786 Pfam C-JID domain 318 453 IPR045344 -
Sebi637g00022 786 SUPERFAMILY L domain-like 24 649 - -
Sebi637g00022 786 Gene3D Ribonuclease Inhibitor 1 157 IPR032675 -
Sebi637g00022 786 Gene3D Ribonuclease Inhibitor 513 656 IPR032675 -
Sebi637g00022 786 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 233 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi637g00022 Sebi-Chr637 511050 514202 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi637g00022 1 244 WRKY Transcription Factor Family AT4G12020 28.571 6.57e-18 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi637g00022 - - tpra:123891409 565.844