Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi637g00017 ATGGAGAGTTTGTTGAAGGATTTCGAACTGAAAAACAAGGAGCGTTCCATCGAAGCTTTGAGTAGATGGAGATCTTACGTCTCTTTGGTCAAGAACCGTCGCAGAAGGTTCCGCAATGTCGCAGATCTCGAAAAACGTACCCAAACACAGGAGCACATCCAAAAGTTACAGGGAAAGATACGGTCTGTTATCATTGCCCAACAAGCAGCACTACATTTTACGGATGCTATTGGTACAACTGAATACAAGGTATCAGAGAAGACGAGAGAAGCTGGTTTTGGTATTGAACCAGATGATATTGCATCAGTTGTTCGAAGCCATGACTACAAGAACTACAGAAAAATTGGTGAAGTTGAAGGGATTATAAGTAAACTCTCAGTCTCAGTTGAAGAAGGTGTCAGTCAAGACAGTATACATAGCAGGCAAGAGATTTATGGACTCAACCGTTATCCTGAGAAGCCTTCTAAAAGCTTGCTGATGTTTGTTTGGGATGCATTGCATGATTTAACGCTAATCATTCTTATGGTTTGTGCTATAGTCTCTATAGGTATAGGGCTTCCCACTGAAGGGTGGCCAAAGGGTGTTTATGATGGTCTTGGAATCATACTCAGTGTATTTTTGGTAGTCATTGTTACTGCTATCAGTGACTACCAGCAATCCCTGCAGTTCAGGGATTTGGACAAAGAGAAGAAAAAGATCTTTGTTCAGGTCACCAGGGATGGGAAAAGACAGAAGATCTCAATTTATGATTTGGTAGTGGGAGATATTGTTCATTTGGCAACTGGTGATCAAGTTCCAGCTGATGGGGTTTATATATCAGGGTATTCATTGCTAATTGATGAATCAAGTTTGTCAGGTGAGAGTGAACCGGTAAATATAGATAAACAAAGACCTTTTCTTCTTTCAGGAACCAAAGTGCAAGATGGTCAGGGGAAGATGGTAGTTACAACTGTTGGCATGAGGACTGAATGGGGGAAGTTGATGGAAACTTTAAATGAGGGAGGAGAGGATGAGACTCCACTGCAGGTGAAATTGCATGGAGTTGCTACAATTATTGGTAAAATTGGTTTGACTTTTGCTGTGCTGACATTTGTGGTGTTGACAATAAGGTTTCTGGTTGAAAAAGGAGTTAATGGTGATTTTGGTAGTTGGTCTTCAAATGATGCATTGAAGCTGCTTGACTACTTTGCTATTGCTGTAACCATAATAGTTGTTGCAATTCCTGAAGGATTACCACTAGCTGTGACACTCAGTCTTGCTTTTGCAATGAAAAAATTGATGAATGACAGGGCACTTGTGAGACATCTTTCTGCATGTGAGACTATGGGTTCAGCTAGTTGCATTTGCACAGATAAGACAGGGACACTGACCACTAACCATATGGTGGTTAATAAAATTTGGATATGTGAAAAGACCATGGAAATGAAAGGTAATGAGAGTGCAGACAAACTGAAAACAGAGATATCTGAAGAAGTTCTAAGCATCCTTTTGCAGGCTATATTTCAAAATACTTCATCCGAAGTAGTTAAGGGCAAAGATGGAAATAAGACAATATTAGGAACACCAACTGAATCAGCATTGTTGGAATTTGGCTTGCTTTCAGGTGGTGATTTTGATGCCCAACGTAAAACCTGTGAGGTACTTATGGTTGAGCCTTTCAATTCATCCCGGAAGAAGATGTCTGTGCTTGTGGAACTTCCTGATGGAGGAGGGGTCAGAGCTTTCTGCAAAGGTGCATCAGAGATAGTATTAAAAATGTGTGACAAAATTATTGATTCTAATGGAACAGCTGTTGATCTTCCTGAAGAGCTAGCAAACAAAGTCTCTGATGTTATAAATGGCTTTGCCTCTGAAGCATTGAGAACTCTTTGTTTGGCTGTCAAAGATATAAATGAAAACCAAGGGGAAAAAAGCATCCCTGATAATGGCTATACTCTGATAGCCATTGTGGGAATCAAGGATCCTGTGCGCCCTGGGGTTAGGGAAGCTGTTCAAACTTGTTTAGCAGCTGGAATAACTGTCCGCATGGTCACTGGTGATAACATAAACACAGCTAGGGCTATAGCTAAAGAATGTGGTATACTTACTGAGGATGGTGTAGCCATAGAAGGACCAGCATTTCGTGACTTGTCTCCAGAGCAAATGAAGGATGTCATACCAAGAATTCAGGTAATGGCACGATCCTTACCTCTTGACAAGCATACCTTGGTAACCAATTTGAGGAATATGTTTGGTGAGGTTGTTGCTGTTACTGGTGATGGAACCAATGATGCTCCTGCACTGCATGAGTCAGACATTGGGCTTGCCATGGGGATAGCTGGAACCGAGGTTGCCAAAGAAAATGCTGATGTCATTATAATGGATGATAACTTCACTACTATTGTCAATGTGGCCAAATGGGGACGGGCCATATACATAAACATTCAAAAATTTGTGCAGTTCCAGTTAACAGTCAATGTTGTTGCTCTGGTTATTAACTTTGTTTCTGCATGCATCACTGGATCTGCTCCACTCACAGCTGTTCAGTTGCTTTGGGTCAACTTGATTATGGACACTCTGGGTGCATTGGCCCTGGCAACTGAACCTCCTAATGATGGACTTATGGAAAGACTCCCAGTTGGAAGGACAACAAGTTTTATCACCAAACCAATGTGGAGGAATATTTTCGGTCAAAGTTTATATCAACTAATTGTCCTTGCAATTCTCAATTTTGATGGGAAGAGGCTACTAGGACTTACTGGCTCAGATGCAACTATAATGCTCAACACTTTGATATTCAACTCCTTTGTATTTTGTCAGGTGTTTAATGAGATAAACAGCCGAGAAATTGAAAGGATAAACATATTCAGAGGCATGTTTGACAGCTGGATATTTTTTACTGTGATTTTCTCCACAGTGGTATTTCAAGTAATCATAGTTGAGTTCTTGGGAACATTTGCCAGCACGGTGCCTCTAAACTGGCAATTCTGGTTACTCAGCGTGGTAATTGGAGCAGTTAGCATGCCTATAGCTGCTATCCTCAAGTGCATCCCAGTTGAAAAAGATACTACAAAGCACCATGATGGTTATGAGGCACTGCCTTCTGGTCCTGAGCTGGCATGA 3102 0.412 MESLLKDFELKNKERSIEALSRWRSYVSLVKNRRRRFRNVADLEKRTQTQEHIQKLQGKIRSVIIAQQAALHFTDAIGTTEYKVSEKTREAGFGIEPDDIASVVRSHDYKNYRKIGEVEGIISKLSVSVEEGVSQDSIHSRQEIYGLNRYPEKPSKSLLMFVWDALHDLTLIILMVCAIVSIGIGLPTEGWPKGVYDGLGIILSVFLVVIVTAISDYQQSLQFRDLDKEKKKIFVQVTRDGKRQKISIYDLVVGDIVHLATGDQVPADGVYISGYSLLIDESSLSGESEPVNIDKQRPFLLSGTKVQDGQGKMVVTTVGMRTEWGKLMETLNEGGEDETPLQVKLHGVATIIGKIGLTFAVLTFVVLTIRFLVEKGVNGDFGSWSSNDALKLLDYFAIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMNDRALVRHLSACETMGSASCICTDKTGTLTTNHMVVNKIWICEKTMEMKGNESADKLKTEISEEVLSILLQAIFQNTSSEVVKGKDGNKTILGTPTESALLEFGLLSGGDFDAQRKTCEVLMVEPFNSSRKKMSVLVELPDGGGVRAFCKGASEIVLKMCDKIIDSNGTAVDLPEELANKVSDVINGFASEALRTLCLAVKDINENQGEKSIPDNGYTLIAIVGIKDPVRPGVREAVQTCLAAGITVRMVTGDNINTARAIAKECGILTEDGVAIEGPAFRDLSPEQMKDVIPRIQVMARSLPLDKHTLVTNLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFTTIVNVAKWGRAIYINIQKFVQFQLTVNVVALVINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMERLPVGRTTSFITKPMWRNIFGQSLYQLIVLAILNFDGKRLLGLTGSDATIMLNTLIFNSFVFCQVFNEINSREIERINIFRGMFDSWIFFTVIFSTVVFQVIIVEFLGTFASTVPLNWQFWLLSVVIGAVSMPIAAILKCIPVEKDTTKHHDGYEALPSGPELA 1033
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sebi637g00017 1033 SUPERFAMILY Calcium ATPase, transduction domain A 234 330 IPR008250 -
Sebi637g00017 1033 PRINTS P-type cation-transporting ATPase superfamily signature 751 770 - -
Sebi637g00017 1033 PRINTS P-type cation-transporting ATPase superfamily signature 648 659 - -
Sebi637g00017 1033 PRINTS P-type cation-transporting ATPase superfamily signature 280 294 - -
Sebi637g00017 1033 PRINTS P-type cation-transporting ATPase superfamily signature 775 787 - -
Sebi637g00017 1033 PRINTS P-type cation-transporting ATPase superfamily signature 670 680 - -
Sebi637g00017 1033 PRINTS P-type cation-transporting ATPase superfamily signature 449 463 - -
Sebi637g00017 1033 FunFam Calcium-transporting ATPase 459 655 - -
Sebi637g00017 1033 Pfam Cation transporter/ATPase, N-terminus 116 181 IPR004014 -
Sebi637g00017 1033 PANTHER CATION TRANSPORTING ATPASE 85 1012 - -
Sebi637g00017 1033 FunFam Calcium-transporting ATPase 15 75 - -
Sebi637g00017 1033 FunFam Calcium-transporting ATPase 211 332 - -
Sebi637g00017 1033 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 47 IPR024750 GO:0005516
Sebi637g00017 1033 SMART Cation_ATPase_N_a_2 112 186 IPR004014 -
Sebi637g00017 1033 FunFam Calcium-transporting ATPase 768 1014 - -
Sebi637g00017 1033 Pfam Cation transport ATPase (P-type) 506 590 - -
Sebi637g00017 1033 ProSitePatterns E1-E2 ATPases phosphorylation site. 451 457 IPR018303 -
Sebi637g00017 1033 Gene3D - 15 76 - -
Sebi637g00017 1033 Pfam E1-E2 ATPase 234 427 - -
Sebi637g00017 1033 Gene3D - 132 332 - -
Sebi637g00017 1033 Gene3D - 459 655 IPR023299 GO:0000166
Sebi637g00017 1033 SFLD p-type atpase 431 804 IPR044492 -
Sebi637g00017 1033 CDD P-type_ATPase_Ca_PMCA-like 141 884 - -
Sebi637g00017 1033 NCBIfam calcium-translocating P-type ATPase, PMCA-type 106 1013 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Sebi637g00017 1033 SUPERFAMILY HAD-like 448 856 IPR036412 -
Sebi637g00017 1033 FunFam Calcium-transporting ATPase 648 796 - -
Sebi637g00017 1033 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 455 660 IPR023299 GO:0000166
Sebi637g00017 1033 PRINTS H+-transporting ATPase (proton pump) signature 608 626 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi637g00017 1033 PRINTS H+-transporting ATPase (proton pump) signature 783 808 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi637g00017 1033 PRINTS H+-transporting ATPase (proton pump) signature 751 767 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi637g00017 1033 Pfam Cation transporting ATPase, C-terminus 836 1009 IPR006068 -
Sebi637g00017 1033 SFLD C1.7: P-type atpase like 431 804 - -
Sebi637g00017 1033 NCBIfam HAD-IC family P-type ATPase 546 696 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi637g00017 1033 NCBIfam HAD-IC family P-type ATPase 389 514 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi637g00017 1033 NCBIfam HAD-IC family P-type ATPase 718 839 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi637g00017 1033 NCBIfam HAD-IC family P-type ATPase 201 371 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Sebi637g00017 1033 Gene3D - 164 1010 - -
Sebi637g00017 1033 Gene3D - 446 796 IPR023214 -
Sebi637g00017 1033 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 1012 IPR023298 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sebi637g00017 Sebi-Chr637 438164 447051 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi637g00017 59 1030 Primary Pumps ATPases AT3G57330 73.148 0.0 1473
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi637g00017 K01537 - gmx:100791934 1694.86