Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi635g00001 ATGGAGAATCTAACTAGGAAGGCAATTGAGGAGCTTGTGAAAGGGCGTGAGTGTGCAAACCAACTTAGAAGTGTAATCAATGAAGGAGGCAATGATGGGTCAGTTATAACAACCCCATTTGCTGAACAACTTGTGAGGGAAGTGCTCATGTCCTTTACCAATTCCCTCTTGTTATTGAACAATCCCACTTCTGAATCAGTCTCTGATGTGCAAATCAGAGACTCTTCCAAGTCTGAGGACTCTCAAGAGAGTAATTGCAAGAGTTCCAGCATCAAGGAAAGAAGAGGGTGTTACAAGAGAAGGAGAACTTCACAAACATGGGAGAAAGAATCTGAAGCTCCAATTGAAGATGGACATCAATGGAGAAAGTATGGCCAAAAGACAATCTTGAATACCCAATACCCAAGGAACTATTACAGGTGCACTCACAAATATGATCAAGATTGCAAGGCAACAAAACAGGTTCAGAGAGTTCAAGAGGATCCACCCCTTTTTAAGACCACATACTATGGACACCACACTTGTAGAACCTTGCAAAACACTGAGATGATAGTGGATTCTGTTTCTCCTTCTGATGACTCTACCATGTTCCTTAGCTTTGACAACTCCCTCCCAACACCAGCCAAACAAGATTGCCCCTTTTTCTCATCTTCTTTCCCATCATCATCTTCATCAGTCAAAAGGGAGTGCAAGGAAGAGGAGATTCATCCCTCATCTTCCTCCAATGATTACTTACTCTCTTCTGAACTCACTTTTGATGATTCCACAAGACATGTCACTCTATCATCAACCCTTGACTCAGATCACATAGGGGTCATCCCCGATGTGTTGTATGACTCTGCTGAGTTTGATGATGTCTTTCAGCCCTTTCTTGAACTTAGATGA 885 0.4237 MENLTRKAIEELVKGRECANQLRSVINEGGNDGSVITTPFAEQLVREVLMSFTNSLLLLNNPTSESVSDVQIRDSSKSEDSQESNCKSSSIKERRGCYKRRRTSQTWEKESEAPIEDGHQWRKYGQKTILNTQYPRNYYRCTHKYDQDCKATKQVQRVQEDPPLFKTTYYGHHTCRTLQNTEMIVDSVSPSDDSTMFLSFDNSLPTPAKQDCPFFSSSFPSSSSSVKRECKEEEIHPSSSSNDYLLSSELTFDDSTRHVTLSSTLDSDHIGVIPDVLYDSAEFDDVFQPFLELR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi635g00001 294 SMART WRKY_cls 115 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi635g00001 294 MobiDBLite consensus disorder prediction 67 88 - -
Sebi635g00001 294 SUPERFAMILY WRKY DNA-binding domain 113 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi635g00001 294 Pfam WRKY DNA -binding domain 116 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi635g00001 294 MobiDBLite consensus disorder prediction 72 88 - -
Sebi635g00001 294 Gene3D WRKY domain 100 177 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi635g00001 294 ProSiteProfiles WRKY domain profile. 110 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi635g00001 294 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 210 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi635g00001 Sebi-Chr635 29363 30886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi635g00001 7 258 WRKY Transcription Factor Family AT3G56400 35.424 1.65e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi635g00001 WRKY 1.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi635g00001 - - gmx:100805895 383.645