Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi631g00036 ATGGACACACCAGAGAGGAATCAGGTCAACACTTCCCTCTCCAAGTTTGAGGATTCGCCTGTATTCAACTACATCAATAATTTATCACCTATAAAGCCCGTTAAGTCTGTTCATATTACTCAGACGTTCAATTCTCTTAGCTTTTCATCCCCTCCATCTGTTTTCACATCACCCCATGTCAGCTGTCTCAAAGAATCTAGATTCCTTCGGAGACACAACAACCCATTGGGCACACCAAAGCCTAAGGTTTCATCTGAAGATGTAAATAAAGTTTACTCAAGTGAAGAGGCTCTTGCAAATTCTACTCATGCACATCATAACTCAAATGAATTACAGGAAAGTACTGATCAAGGGACTTCAGTAGGAGATGCTTCAGTTGAGCTACCACAAACCTTACAATATAATTGTGGTAGCCCTGGCTATGATCCACCACTTTGTGGTGCTAAGGCTAACTCTCTTTTGGAATTGCCTGCTGAGGCAGCATCAGATGTTGCCTATGTTCAGGAAGGTTGTAAAACAAATTCAACTGAGCATGAAGTGCATCTTCAGGGAATATGTCAGATCGAGAAGGGTGAAGGCCCGAATTGTGATTGGGATAGTTTAATTCCCAGTGCTACTGATCTGTTGATTTTCAATTCTCCAAATGGAGCAGAAGCTTTAAAGGGTCTCATGCAGAAACCATTGGGCTCTTCTGTACGACTTAGCGATTTTGTGTCTCTGCTTCCACAATCTTCCATCAATAGTGGTCAGAAAATACACATGGTTGATTCAGTTGTTTCTGGTTCTGAACATGAAACTGAAGATCACTGTACTGAGCCAATAGCAGCCACAGACACTGACCCCACACAGGACAATCTTGCCAATGTTGCTTTGATGACTAGCAATCCAAATGAGAAGGTGGATGATAAGCTTGTTTCTATCACGCACCGTGGTATAAGGAGGCGCTGCCTTGACTTTGAGATGGCCAGTGTGCGAAGGAAGAACTCAGATGATAATTCAAACACTGGCTCCAGTACACCACAGCCTGAAGTAAGGAATGCTGCAAATGAAAAGCAACTGCTTCCTGCAAAACGTAATGGAAATTCACAAAGTCTGCCCAGCTCTACTACTTCCTTGCAACTCTCCACAAGCCAAGAACATCAGCATCTAGCCTTGGTATCTGTATCATCTGAAAGAGAATTGGATCCATCAGAAAATGGTGTTCAGCCTGGTGAAGATTGTTCCCAGGCATCAGCTTACATGGCTGGTGAAGATTTCAATCCGAATAGCCCCAAAAAGAAAAGGCGTAAGTTGGAGCCAGCTGGAGAAACTGAGGGCTGCAAACGTTGTAATTGCAAGAAATCAAAGTGTTTGAAGCTTTATTGTGAGTGCTTTGCTGCTGGTGTCTACTGCATAGAACCCTGCTCCTGTCAGGATTGCTTCAACAAACCTATTCATGAAGATACCGTTCTTCAAACTCGCAAGCAGATTGAATCTCGTAACCCTCTTGCATTTGCTCCTAAAGTCATCAGAAATTCTGATTCTGCACCTGAAATTGGGGATGACCCAAATAAAACTCCAGCTTCAGCACGGCACAAAAGAGGATGCAACTGCAAGAAATCAAACTGCCTGAAGAAATATTGTGAATGTTATCAGGGTGGTGTTGGTTGCTCCATTAGCTGTAGATGTGAAGGGTGCAAGAACGCATATGGTAGAAAGGATGGTTCTGCTCCTATAGGAATAGAAGCTGAGCCAGAAGAAGAAACAGAAGCAAGTGACAAGGGTGTGGCAGAAAAAGCTTTACAGAAAACGGAAATTCAGAATACTGAAGAACGTCCAGAATCTGCTGTTGTCTCAACACCATTACGGCTTTCCAGGCCATTGCTTCCATTGCCCTTTTCATCAAAGGGAAAGCCACCAAGATCTTTTGTTGCAACCATCTCTGGTTCTGGATTGTTTGCCAGCCAGAAGCTTGGGAAACCCAATTCTCTTTGGTCTCAAGCTAAGCATTTTCAACCTGTTCCAGATGATGAAATGCCTGATATTCTCCGTGGTGATAGCTCTCCTGTCGCTTGCATCAAAACTTCATCTCCAAATAGCAAGAGGATCTCCTCTCCTAACTGTGACTTGGGATCATCTCCTAGTCGCAGAGGAGGCAGAAAGTTGATATTACAATCTATTCCTTCATTTCCTTCTCTCACCCCTCATCCTTAG 2193 0.4346 MDTPERNQVNTSLSKFEDSPVFNYINNLSPIKPVKSVHITQTFNSLSFSSPPSVFTSPHVSCLKESRFLRRHNNPLGTPKPKVSSEDVNKVYSSEEALANSTHAHHNSNELQESTDQGTSVGDASVELPQTLQYNCGSPGYDPPLCGAKANSLLELPAEAASDVAYVQEGCKTNSTEHEVHLQGICQIEKGEGPNCDWDSLIPSATDLLIFNSPNGAEALKGLMQKPLGSSVRLSDFVSLLPQSSINSGQKIHMVDSVVSGSEHETEDHCTEPIAATDTDPTQDNLANVALMTSNPNEKVDDKLVSITHRGIRRRCLDFEMASVRRKNSDDNSNTGSSTPQPEVRNAANEKQLLPAKRNGNSQSLPSSTTSLQLSTSQEHQHLALVSVSSERELDPSENGVQPGEDCSQASAYMAGEDFNPNSPKKKRRKLEPAGETEGCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLQTRKQIESRNPLAFAPKVIRNSDSAPEIGDDPNKTPASARHKRGCNCKKSNCLKKYCECYQGGVGCSISCRCEGCKNAYGRKDGSAPIGIEAEPEEETEASDKGVAEKALQKTEIQNTEERPESAVVSTPLRLSRPLLPLPFSSKGKPPRSFVATISGSGLFASQKLGKPNSLWSQAKHFQPVPDDEMPDILRGDSSPVACIKTSSPNSKRISSPNCDLGSSPSRRGGRKLILQSIPSFPSLTPHP 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi631g00036 730 MobiDBLite consensus disorder prediction 98 122 - -
Sebi631g00036 730 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 441 476 IPR005172 -
Sebi631g00036 730 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 527 562 IPR005172 -
Sebi631g00036 730 MobiDBLite consensus disorder prediction 328 346 - -
Sebi631g00036 730 ProSiteProfiles CRC domain profile. 439 564 IPR005172 -
Sebi631g00036 730 MobiDBLite consensus disorder prediction 355 381 - -
Sebi631g00036 730 MobiDBLite consensus disorder prediction 683 705 - -
Sebi631g00036 730 SMART CXC_2 524 565 IPR033467 -
Sebi631g00036 730 SMART CXC_2 438 479 IPR033467 -
Sebi631g00036 730 MobiDBLite consensus disorder prediction 665 730 - -
Sebi631g00036 730 MobiDBLite consensus disorder prediction 324 381 - -
Sebi631g00036 730 MobiDBLite consensus disorder prediction 388 407 - -
Sebi631g00036 730 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 729 IPR044522 GO:0003700
Sebi631g00036 730 MobiDBLite consensus disorder prediction 392 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi631g00036 Sebi-Chr631 386518 391273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi631g00036 16 729 CPP Transcription Factor Family AT4G14770 45.000 1.16e-158 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Sebi631g00036 TCR 2.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi631g00036 - - gmx:100804447 1157.51