Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi631g00006 ATGGCGCTTCTTTTTTCTTGGCACTTCGGCTCTTCTATCAAGGGTGATTTAGAGAGGCCCCTCGTTGATGATGAAGACGATGCAGACGTTTCATTTAATCAGAGCAATGAACTGCCTAGAGATTATGATCTTGAAGGTGCCTGTTATCCCAATGAAGCTCATTATCGATCACCTCGAACCCATGGCCAAGGACTTGTTCATAAGCAAAGGCTTCAGTCTCAGGCCCAGGCCCTTTCCGTTTCATCTAATTTACCCCAAGGTGGTGATACTTTGATTGTAGATGTAATCTCTGATCCTTCTGAAGACGTTGATGTTGGTCAAACACTTAAGCTCTCTCCAGCTCATTTAGCTCACATTCAAAACCATACCACTCCTAATTTTCAAAATGATAGACTGCAAGACTTTGTGCAAAGAGATATATCTGATCAAAGAAGTTGCCTCACTCTGGAGGTTATCAGTGGTCCTTCTCGTGGACTTCGTTGTTCTGTACAATCAACAAATCCCTCTCGTCTGCCACTAACCTTGGGAAGAGTTTCCCCAAGTGATTTATTGATAAAGGATTCAGAAGTGTCAGGAAAGCATGCATTGATAAAGTGGAATTTGGATAAGATGAAATGGGAGTTGGTGGATATGGGTAGCCTAAATGGAACACTTTTGAATTCTAAGCCAATCAATCATCCAGACACTGAAAGTAGGCATTGGGGAGATCCAATGAATCTTGCTAATGGAGATATTATAACACTTGGAACAACATCAAAAGTAATTGTTCACATTACTTCGCAAAATCAGCATCACATTCCCTTTGGAGTTGGTATGGCATCTGATCCCATGGCTTTGCGTCGAGGAGGAAAAAAGCTTCCCATGGAAGATGTTTGCTATTATCAATGGCCTCTACCTGGGCTCGATCAGGGAGCTAACCCAACCCTTTACCCCAATTTTCAGTTTGGAATTTTTGGCATTTGTGATGGGCATGGTGGAGATGGGGCTGCCAAATCTGCTAGCAATTCTATCATCTGCCCTATGTTGGCGACTATGGACAGTAGACTTGATGAATAG 1056 0.4271 MALLFSWHFGSSIKGDLERPLVDDEDDADVSFNQSNELPRDYDLEGACYPNEAHYRSPRTHGQGLVHKQRLQSQAQALSVSSNLPQGGDTLIVDVISDPSEDVDVGQTLKLSPAHLAHIQNHTTPNFQNDRLQDFVQRDISDQRSCLTLEVISGPSRGLRCSVQSTNPSRLPLTLGRVSPSDLLIKDSEVSGKHALIKWNLDKMKWELVDMGSLNGTLLNSKPINHPDTESRHWGDPMNLANGDIITLGTTSKVIVHITSQNQHHIPFGVGMASDPMALRRGGKKLPMEDVCYYQWPLPGLDQGANPTLYPNFQFGIFGICDGHGGDGAAKSASNSIICPMLATMDSRLDE 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi631g00006 351 PANTHER ANGIOGENIC FACTOR WITH G PATCH AND FHA DOMAINS 1 172 259 - -
Sebi631g00006 351 SUPERFAMILY SMAD/FHA domain 145 256 IPR008984 GO:0005515
Sebi631g00006 351 ProSitePatterns PPM-type phosphatase domain signature. 317 325 IPR000222 GO:0043169
Sebi631g00006 351 FunFam Protein phosphatase 2C 70 142 276 - -
Sebi631g00006 351 CDD FHA_PP2C70-like 147 257 - -
Sebi631g00006 351 Pfam FHA domain 174 249 IPR000253 GO:0005515
Sebi631g00006 351 ProSiteProfiles Forkhead-associated (FHA) domain profile. 173 224 IPR000253 GO:0005515
Sebi631g00006 351 SMART FHA_2 172 224 IPR000253 GO:0005515
Sebi631g00006 351 SUPERFAMILY PP2C-like 282 342 IPR036457 -
Sebi631g00006 351 Gene3D - 141 278 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi631g00006 15 345 PP2C-type Phosphatase Gene Family AT5G19280 53.061 2.41e-112 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi631g00006 K01090 - gmx:100170642 518.079