Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi62g00199 ATGGGTTGTGTTCATGGCAAGTGCTGTAGCCGCTACCCTCCACCTTCAGTGGGTGGCTCCAGGGACTACCGAGAACCTGGTCCTTTCTGTGGACAAAGGAAACACATGCTCACTCAGAGATCACTGCACTCTGTTCCTGTCCCTTCTCACAACTTCACTTTGGAATACTCTGTTCTCACTCAGCGGGGATACTACCCTGACTCACCTGATAAGGAAAACCAAGATAGTTTCTGCATTAGGACACAATTTCAAGGTAACCCAAGTGTCCATTTCTTTGGTGTCTATGATGGGCATGGTGAATTTGGTGGCCAGTGTTCGAACTTTGTTAAGGATAGGTTGGTAGAAAATTTGTCAAATGACCCTACCTTGTTGGAGGATCCTGTAAAGGCCTACACTTCAGCATTCTTGGCAACAAATGATGACTTGCATAAGAATGAGATTGATGATTCCATGAGTGGCACTACCGCAATTACAGTGCTTGTTATTGGGGACACACTTTATGTTGCTAATGTTGGTGATTCTAGAGCAGTGCTGGCTGTTAAGGATGGGAATCGAATTGTGGCTGAGGACTTGTCATCTGATCAGACACCATTTAGGAGAGATGAATATGAAAGAGTGAAACTTTGTGGGGCAAGGGTGTTGAGTGTTGATCAGGTGGAAGGGCATAAGGATCCGGATATCCAGAATTGGGGTGATGAAGAGAGTCAGGGTGATGATCCTCCGAGATTGTGGGTTCAGGATGGGATGGTTCCAGGAGCTGCTTTTACAAGGAGTGTAGGGGATAGTGTGGCAGAGACTATTGGTGTCATTGCTGTTCCGGAGGTGTCAACAGTTCAGCTTACGCCTAATCATCTTTTTTTGTTGTTGCAAGTGATGGTGTATTTGAGTTCCTATCAAGCCAAACTGTTGTTGATATGGCTGCAAGTTATTCAGATCCCCGTGATGCATGTGCTTCCATTGCTGGAGAGTCTTATAAACTATGGTACACCTGGATTCGGATCAGGCGAGATCAGTGTCAGTACTGTAACGAGGGCCAAGAAGGGAAAGGGAACTTCTGAGATATCTACTACCACTGGGTTAGATGTTTATCATCCTGTGAGGAATGGTTTCTCTGATTTACAATCCTGTCAGCATGTGGTCTCAACGAGAAGCCCAGCCTTAGTAGTTCCCTCTCCAGCATGTCAAAGACCAATTGAATTGGTAGAGTCTTGCTAG 1215 0.4568 MGCVHGKCCSRYPPPSVGGSRDYREPGPFCGQRKHMLTQRSLHSVPVPSHNFTLEYSVLTQRGYYPDSPDKENQDSFCIRTQFQGNPSVHFFGVYDGHGEFGGQCSNFVKDRLVENLSNDPTLLEDPVKAYTSAFLATNDDLHKNEIDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVKDGNRIVAEDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGHKDPDIQNWGDEESQGDDPPRLWVQDGMVPGAAFTRSVGDSVAETIGVIAVPEVSTVQLTPNHLFLLLQVMVYLSSYQAKLLLIWLQVIQIPVMHVLPLLESLINYGTPGFGSGEISVSTVTRAKKGKGTSEISTTTGLDVYHPVRNGFSDLQSCQHVVSTRSPALVVPSPACQRPIELVESC 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi62g00199 404 MobiDBLite consensus disorder prediction 222 241 - -
Sebi62g00199 404 Gene3D - 42 290 IPR036457 -
Sebi62g00199 404 ProSiteProfiles PPM-type phosphatase domain profile. 55 404 IPR001932 -
Sebi62g00199 404 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Sebi62g00199 404 FunFam Phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein 50 300 - -
Sebi62g00199 404 SUPERFAMILY PP2C-like 42 289 IPR036457 -
Sebi62g00199 404 MobiDBLite consensus disorder prediction 222 240 - -
Sebi62g00199 404 CDD PP2Cc 71 289 IPR001932 -
Sebi62g00199 404 PANTHER PROTEIN PHOSPHATASE 55 289 IPR015655 GO:0004722|GO:0006470
Sebi62g00199 404 SMART PP2C_4 51 342 IPR001932 -
Sebi62g00199 404 Pfam Protein phosphatase 2C 73 289 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi62g00199 Sebi-Chr62 2172843 2175633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi62g00199 1 289 PP2C-type Phosphatase Gene Family AT3G06270 71.626 1.54e-144 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi62g00199 - - aprc:113872580 650.203