Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi62g00178 ATGCAGTCATCTGTGGATGTAGATTTCTTTACTGAATATGGTGAAGGGAGCAGATACAGAATAGAGGAAGTAATTGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCATATGATTCACACACGGGAGAAAAGGTTGCTATAAAGAAAATCAATGATATATTTGAACATGTTTCTGATGCCACTCGTATTCTTCGTGAGATTAAGCTTCTTAGACTTTTACGCCATCCGGATATTGTGGAGATCAAGCATATTTTGTTACCTCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTTTTTGAACTCATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGACCTAACACCAGAACATTACCAGTTTTTCCTCTATCAGCTTCTTCGGGGCTTGAACAAATGTTTTTCACCGAGATTTAAAGCCAAAAAATATTTAGCAAATGCTGACTGCAAACTGAAGATTTGTGACTTTGGTCTTGCAAGAGTGGCTTTTAATGATACACCCACTGCTATATTCTGGACAGATTATGTTGCAACAAGGTGGTATAGGGCGCCTGAGTTGTGTGGATCCTTTTTCTCCAAGTATACACCAGCAATAGATATATGGAGCATTGGCTGCATTTTCGCAGAACTTTTGACCGGAAAACCTCTTTTTCCTGGGAAGAATGTTGTCCATCAACTGGACCTCATGACTGATCTTCTTGGAACACCATCTCCTGAAGCCATTGGCAGGGTACGGAATGAGAAAGCTCGGAGATACTTGAGCAGCATGCGTAAGAAGAAGCAAGTTCCTTTCCAACAGAAATTTCCTAATGCAGACCCCCTTGCTCTTCGTTTGTTAGAAAGAATGCTGGCATTTGAGCCTAAGGATCGGCCTACTGCTGAAGAGGCCCTAGCAGATCCATATTTTAAAGGCTTGGCCAAGGTTGAGAGAGAACCTTCTGCTCAGCCAGTTACCAAGATGGAATTTGAATTTGAGAGACGCAGGATAACTAAGGAAGATGTACGAGAACTTATATACCGAGAGATTCTTGAGTACCATCCAAAGATGTTAAAGGAATTTCTCGAGGGAGCAGAACCAACAGGTTTCATGTATCCAAGTGCCGTGGACCACTTCAAGAAGCAATTTGCATATCTTGAGGAGCATTATGGCAAGGGAGGAACTGTTGCTCCACCTGAGAGGCAACATGCATCGTTACCCCGACCATGTGTGTTGTATTCTGATAACTCAGTACACAATAATACGGCTGAGGTTGCTGATGATCTATCCAAATGTTGCATCAAAGAAGTTGAGAAACCACCCGTAGATAGAAGTAGTGCTATCCCCATGACTCGGCTACCTTTACAAGCTCCTCAAAATATTCAAGGTGTTGCTGCAAGGCCTGGAAAAGTTGTTGGTTCAGTAATGCGATACAACAACTGTGGGGTGGCAGTGACAGCAGAGGCTGAACAACGGAGGGTGGTTAGGAATCCATCTGTTTCAGCTCAGTATGCTGCTTCAAGCTGTTCATATCCTAGGAGAAACCCAACCTATAAAAATGAGAGGGCAGAAGATGATGGTGGGATTGAAGGTTCTAATGGATTGCAGCCAAAGCCTCAATACATGGCAAGAAAAGTTGCTGCTGCTCAAGGTGGAGCTGGTGGTCAGTGGTATTGA 1662 0.4272 MQSSVDVDFFTEYGEGSRYRIEEVIGKGSYGVVCSAYDSHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLNKCFSPRFKAKKYLANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDLLGTPSPEAIGRVRNEKARRYLSSMRKKKQVPFQQKFPNADPLALRLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLEGAEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVAPPERQHASLPRPCVLYSDNSVHNNTAEVADDLSKCCIKEVEKPPVDRSSAIPMTRLPLQAPQNIQGVAARPGKVVGSVMRYNNCGVAVTAEAEQRRVVRNPSVSAQYAASSCSYPRRNPTYKNERAEDDGGIEGSNGLQPKPQYMARKVAAAQGGAGGQWY 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi62g00178 553 CDD STKc_TDY_MAPK 18 350 - -
Sebi62g00178 553 Gene3D Transferase(Phosphotransferase) domain 1 105 328 - -
Sebi62g00178 553 ProSitePatterns Protein kinases ATP-binding region signature. 25 49 IPR017441 GO:0005524
Sebi62g00178 553 MobiDBLite consensus disorder prediction 506 532 - -
Sebi62g00178 553 ProSiteProfiles Protein kinase domain profile. 19 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi62g00178 553 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 18 329 - -
Sebi62g00178 553 Gene3D Phosphorylase Kinase; domain 1 34 350 - -
Sebi62g00178 553 FunFam Mitogen-activated protein kinase 9 113 - -
Sebi62g00178 553 Pfam Protein kinase domain 19 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi62g00178 553 SUPERFAMILY Protein kinase-like (PK-like) 16 309 IPR011009 -
Sebi62g00178 553 FunFam Mitogen-activated protein kinase 105 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi62g00178 Sebi-Chr62 1996750 2000824 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi62g00178 2 553 MAP Kinase Gene Family AT5G19010 77.425 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sebi62g00178 Pkinase 2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi62g00178 - - gmx:100814013 994.186