Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi62g00172 ATGGGGGCCACGGGCACCGGCAAGACGAAGTTAGCCATAGACGTGGCCAAACATTTCCAACCAGCAGAGATAGTGAACTCAGATAAAATACAAGTTTACAAAGGTCTTGACATCACAACCAATAAGGTTACAGAGGAAGAGTGTGCTGGGGTCCCACACCATCTCTTAGGAGCACGTGTGGATCGCATGATTGAAGCTGGCCAAGTTGAAGAGGTTCGTGAATTCTTCGACCCTTTTGGTGATTACACGAGAGGGATTCGAAGAGCAATTGGGGTGCCTGAATTTGACGATTTTCTAAAAGCAGAGGCAAACGCAGCCGATGAAAGAACCAAAAAGAGGCTCCTTGAGGCTGCCATTGCAAGGATCAAAATCAACAACTGCACGCTAGCGAATCGACAGCTCCAGAAGATTCATCGACTCTACAGCTTGTGGAAGAGAAGCATGCACCGTCTTGATGCCACCGAGTCATTCCTGAGAAGGGGTTGTGCCTGTGTGGAAGCATGGGAGAATCATGTGCTTGCAAGGAGCCTCATGATTCTTCACAATTTCCTCTACAAGGAAAAGACCCATCTAATTGTGTCCACAAAAGATGTAATTGCTGCTGTTTCTTCGCCACCGCCGCCGGTATCATTGCCCGCCGTTGCGGCGGTAACTCATTAG 660 0.4864 MGATGTGKTKLAIDVAKHFQPAEIVNSDKIQVYKGLDITTNKVTEEECAGVPHHLLGARVDRMIEAGQVEEVREFFDPFGDYTRGIRRAIGVPEFDDFLKAEANAADERTKKRLLEAAIARIKINNCTLANRQLQKIHRLYSLWKRSMHRLDATESFLRRGCACVEAWENHVLARSLMILHNFLYKEKTHLIVSTKDVIAAVSSPPPPVSLPAVAAVTH 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi62g00172 219 Gene3D - 57 203 IPR027417 -
Sebi62g00172 219 Gene3D - 1 56 IPR027417 -
Sebi62g00172 219 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 57 IPR039657 -
Sebi62g00172 219 Pfam IPP transferase 31 57 - -
Sebi62g00172 219 Pfam IPP transferase 58 135 - -
Sebi62g00172 219 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 141 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi62g00172 Sebi-Chr62 1873221 1874102 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi62g00172 1 58 C2H2 Transcription Factor Family AT2G27760 63.793 2.77e-19 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi62g00172 K10760 - gmx:100812928 206.453