Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi62g00142 ATGAGTTGCTTCCCATGTTGCAATAAGTCAGATGTTGAATCGTCCTCTTACAGAGCAAGCTCTAGGAAAATTTCCAAAGGCAGGAGAACATTCAAATCATTGGCAGCGGCTATGTCACTTAAATCAGGTAGCAGCAGGCATAGACAAATTAATGCAGAGTTACTAAAATATGGAGCTGCAAAAAATGATGTTAAAATATTCACATATGAAGAACTCGCTGAAGCAACAAAAAACTTCAGTCCTGATTGCCTGGTGGGCGAAGGTGGATTTGGGAATGTCTATAAAGGATACATAAAGAGCATTGAACAAACCGTAGCTGTGAAGCAACTCAACAGGGAAGGAGCTCAAGGAACACGAGAATTTTTTGCAGAGGTTTTGATGTTAAGCATGGTTAAACACCCAAACCTGGCACAACCTTTGTTTAAGGACAGAACCAAGTTTGCTCTGATGGCTGACCCTTTGCTTAAAGGTCAGTTCCCTGTGAAGGGTTTATTTCAAGCTCTGGCAGTGGCAGCAATGTGTCTCCAAGAGGAAGCTGACACACGACCTTTCATGGATGATGTTGTAACGGCTCTTCAGCATCTAGCAGTACGCAAAGTTGAAGAAAAAGACATTGCTGGTGAATCTGTAAAAATTGCTGGACATGTTGAATCTTTTAGAGCTATGAGTTCAATGGGATCTGAAAGGGCGTAG 693 0.4199 MSCFPCCNKSDVESSSYRASSRKISKGRRTFKSLAAAMSLKSGSSRHRQINAELLKYGAAKNDVKIFTYEELAEATKNFSPDCLVGEGGFGNVYKGYIKSIEQTVAVKQLNREGAQGTREFFAEVLMLSMVKHPNLAQPLFKDRTKFALMADPLLKGQFPVKGLFQALAVAAMCLQEEADTRPFMDDVVTALQHLAVRKVEEKDIAGESVKIAGHVESFRAMSSMGSERA 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi62g00142 230 ProSiteProfiles Protein kinase domain profile. 79 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi62g00142 230 Gene3D Phosphorylase Kinase; domain 1 63 145 - -
Sebi62g00142 230 PANTHER OS07G0668900 PROTEIN 137 203 - -
Sebi62g00142 230 Pfam Protein kinase domain 84 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi62g00142 230 SUPERFAMILY Protein kinase-like (PK-like) 64 138 IPR011009 -
Sebi62g00142 230 ProSitePatterns Protein kinases ATP-binding region signature. 85 108 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi62g00142 Sebi-Chr62 1509210 1511244 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi62g00142 136 197 Glycoside Hydrolase AT3G07070 61.290 1.23e-17 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Sebi62g00142 Pkinase 4.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi62g00142 - - vvo:131599912 211.075