Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi62g00121 ATGGATGAGGCTACACAATCTAATGCTGAGTTGTTGGAATGGCCAAAGAAAGATAAGCGCCGCTTCCTGCATGCTGTGTACCGTGTTGGTGATCTTGATCGCACCATCAAGTTTTATACTGAATGTTTTGGGATGAAGCTTTTGAGGAAAAGAGATGTTCCGGAAGAGAAATACTCCAATGCTTTCCTAGGATTTGGCCCTGAACAATCCCATTTTGTTGTGGAATTAACTTATAATTATGGGGTGACCTCATATTATATTGGAACTGGCTTTGGACATTTTGCTATTGCAACTCCAGATGTTTACAAATTGGTTGAAGACATCCGGGCTAAGGGTGGAAACATCACTAGGGAACCTGGTCCAGTTAAGGGTGGAACAATTGTTATTGCCTATGTGGAGGATCCTGATGGTTACACTTTTGAGCTCATCCAAAGAGCTTCAACCCCTGAGCCACTCTGTCAAGTAATGCTTCACGTTAGTGATTTAGAGCGCTCAATTAAGTTTTATGAAAAGGCTTTGGGCATGAAGGTAGTAAACGTTTATAGACCTGACAATTACGATATAGCTATGCTTGGGTATGCAGAGGAGCATGAGACAACTGTGTTGGAGCTGATATATAAACATGGTGTCACTGAGTACACCAAGGGAAATGGCTATGCACAGGTTGCTATTGGCACTGATGATGTATACAAGAGTGCTGAGGTAGTGAACATAGTCACACAAGAGCTAGGAGGGACAATTACTCGGCAACCAGGGCCAATTCCTGGCATTAACACAAAGATAACTTCTTTCTTAGATCCAGATGGGTGGAAAATTGTCTTGGTTGACAATCAAGATTTTCTGAAGGAACTGGAGTGA 858 0.4231 MDEATQSNAELLEWPKKDKRRFLHAVYRVGDLDRTIKFYTECFGMKLLRKRDVPEEKYSNAFLGFGPEQSHFVVELTYNYGVTSYYIGTGFGHFAIATPDVYKLVEDIRAKGGNITREPGPVKGGTIVIAYVEDPDGYTFELIQRASTPEPLCQVMLHVSDLERSIKFYEKALGMKVVNVYRPDNYDIAMLGYAEEHETTVLELIYKHGVTEYTKGNGYAQVAIGTDDVYKSAEVVNIVTQELGGTITRQPGPIPGINTKITSFLDPDGWKIVLVDNQDFLKELE 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi62g00121 285 PANTHER LACTOYLGLUTATHIONE LYASE 5 285 - -
Sebi62g00121 285 ProSitePatterns Glyoxalase I signature 2. 88 100 IPR018146 GO:0004462|GO:0046872
Sebi62g00121 285 ProSitePatterns Glyoxalase I signature 1. 154 175 IPR018146 GO:0004462|GO:0046872
Sebi62g00121 285 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 151 277 IPR037523 -
Sebi62g00121 285 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 21 145 IPR037523 -
Sebi62g00121 285 Gene3D - 148 285 IPR029068 -
Sebi62g00121 285 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 23 142 IPR004360 -
Sebi62g00121 285 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 154 272 IPR004360 -
Sebi62g00121 285 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 152 277 IPR029068 -
Sebi62g00121 285 Gene3D - 1 147 IPR029068 -
Sebi62g00121 285 NCBIfam lactoylglutathione lyase 22 147 IPR004361 GO:0004462|GO:0046872
Sebi62g00121 285 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 20 146 IPR029068 -
Sebi62g00121 285 CDD GlxI_Ni 23 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi62g00121 Sebi-Chr62 1267144 1268948 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi62g00121 24 143 Calmodulin-binding Proteins AT1G08110 29.655 1.74e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi62g00121 K01759 - gmx:100794901 516.924