Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi62g00099 ATGAAAATGGAAACTTTCCACCACTGCAGCTGGGGAATATCCGGTAGAGCCATTGCTGGCATTGCTGTTGGAGGGGCTGTTGGGATCTTATTGTTGGCACTTGCTATATATGTTGGGATATATAGAAGAAAGAAAGTGGATGAGGTAACCCTTCTCCCAGTCCCAGGAGCATCTGAAGATCAGTGTAGTCAACTCCAACATGGTTGTGGAAGCAGTGTGGACAAGGCATCAGAATCTTCTATTGTTGCTTCACCAAGGTTGACAGGTATTACAGTGGACAAGTCAGTGGAGTTCTCATATGAGGAGCTTGCCAAAGCTACTGATGGCTTTAGCACTGCTAATATAATTGGTCGAGGTGGCTTTGGATCTGTTTACTACGCTGAGCTTAGAAATGAGAAAGCTGCAATTAAAAAGATGGATATGCAAGCATCAAAAGAATTCCTTGCAGAACTAAAGGTTCTGACACATGTCCATCACTTGAACTTGGTGCGGTTAATAGGATATTGTGTTGAGGGCTCCTTATTTTTGGTTTATGAGTACATTGAGAACGGCAATTTAAGGAGGGATCCGTTATCATGGCCAGCTAGAGTTCAAATCGCCCTTGATGCAGCAAGAGGACTAGAATACATCCATGAGCATACAGTTCCTGTCTACATCCATCGAGATATCAAATCAGCCAACATTTTGATAGACAAAAATTTCCGTGGCAAGGTTGCAGATTTTGGTCTGACAAAACTGACTGAATATGGTAGTTCTTCATTACAAACACGTCTTGTGGGTACATTTGGTTATATGCCTCCAGAATATGCACAATATGGTGAAGTTTCCCCCAAAATAGATGTATATGCTTTTGGAGTTGTTCTCTATGAACTTGTATCTGGCAAGGAAGCTATTGTCAAGACAAACGAACCTGAGAACGAATCAAAAGGATTAGTTGCATTGTTTGAGGAAGTTCTTGGTCTGCCAGAACCAAAAGAAGATCTTCATAAACTTGTTGACCCTAGGCTTGGTGACAACTACCCTCTTGAGTCAGTATTTAAGATGTCTCAGCTTGCCAAAGCTTGTACACATGAAAACCCTCAACTAAGGCCAAGCATGAGATCAATTGTAGTTGCCTTAATGACACTTTCATCAGCAGCTGAGGATTGGGATGTTGGCTCTTTCTATGAAAACCAAGCTTTAGTGCATCTAATGTCCGGAAGGTAG 1206 0.4196 MKMETFHHCSWGISGRAIAGIAVGGAVGILLLALAIYVGIYRRKKVDEVTLLPVPGASEDQCSQLQHGCGSSVDKASESSIVASPRLTGITVDKSVEFSYEELAKATDGFSTANIIGRGGFGSVYYAELRNEKAAIKKMDMQASKEFLAELKVLTHVHHLNLVRLIGYCVEGSLFLVYEYIENGNLRRDPLSWPARVQIALDAARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLTKLTEYGSSSLQTRLVGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELVSGKEAIVKTNEPENESKGLVALFEEVLGLPEPKEDLHKLVDPRLGDNYPLESVFKMSQLAKACTHENPQLRPSMRSIVVALMTLSSAAEDWDVGSFYENQALVHLMSGR 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi62g00099 401 SMART serkin_6 110 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi62g00099 401 ProSitePatterns Protein kinases ATP-binding region signature. 116 138 IPR017441 GO:0005524
Sebi62g00099 401 Pfam Protein kinase domain 112 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi62g00099 401 ProSiteProfiles Protein kinase domain profile. 110 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi62g00099 401 Gene3D Phosphorylase Kinase; domain 1 91 176 - -
Sebi62g00099 401 Gene3D Transferase(Phosphotransferase) domain 1 177 385 - -
Sebi62g00099 401 FunFam LysM receptor kinase 2 89 180 - -
Sebi62g00099 401 SUPERFAMILY Protein kinase-like (PK-like) 90 373 IPR011009 -
Sebi62g00099 401 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 13 387 IPR044812 GO:0019199|GO:0045087
Sebi62g00099 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Sebi62g00099 401 FunFam PTI1-like tyrosine-protein kinase 3 176 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi62g00099 Sebi-Chr62 1069562 1073042 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi62g00099 12 401 Receptor kinase-like Gene Family AT3G21630 60.957 2.07e-160 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Sebi62g00099 Pkinase 1.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi62g00099 - K13429 gmx:100802308 657.907