Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi62g00095 ATGCTTTTGAGCCCTGCAACCACAATGGCTCATACCCGCTTCCCTTTCTCTCTCTTTCTCGCCGCGTTTGTGTCATTCTATTTGATCTTTGTTGCTATTCCTCTTGTCCTCGCCAACACTGACCCTTCTGATGTTCAAGCTCTTGGGGTCATGTACAACGCGTTAAATAGTTCAACACAGCTAACGGGTTGGAAAATCGGTGGTGATCCATGTGGAGAGTCATGGAAAGGGATAACATGTGAGGGTTCAGCCGTTGTTTCCATTGAACTCTCAGGTTTAGGACTTGATGGGACTCTGGGATACCTGCTTTCAGACCTTATGTCACTGAAAAAGCTTGACTTAAGTGACAACAAGATGCACGATACAATTCCCTACCAGTTGCCACCAAATCTTACTAGCCTAAATCTTGCAAGAAATAACTTATCTGGAAATCTTCCTTATTCCATTTCTGCCATGGCTTCACTCAATTATCTGAATGTAAGCAACAATGCACTCTCCCAGTCAATTGGCGACATTTTTGCTACTCTTCCGGATCTTGGTACTGTGGATCTATCATTCAATAACTTTTCTGGGGATCTTCCTCCTTCATTTGGTTCACTGTCCAATCTTTCTTCTCTCTTCTTGCAGAAGAACCAGTTGACTGGCTCTCTTGATGTTCTAGCTGGTTTGCCTTTGGATACTTTAAATGTTGCAAACAATAATTTCAGTGGATGGATACCTCGTGAGCTTAAATCGATCCATAACTTCATATATGATGGAAATTCTTTTAATGATGGTCCTGCTCCTCCTTCACCAACATTTACAGCACCTCCACCTAGTGGATCTCATAAAAGCCATCATCATTCTGGGTCTGGTTCACATAATAAAACACAGGGGTCTGATAATGAAAATTCTGATGACCATAAGGGTTTGACAGCAGGGGCCGTTGTAGGCATTATTTTAGGTTCAGTGTTGGTGGCTGTTATTTTGTTACTTGTTCTTGTTTTCTGTATCCGAAAGGTAAAAGGGAAGAAAAAGGGTGCAAGAACTTCTAGTGGGCGCATTCCTCCTGGAATTACTAATGTAACTCCTCAGATGCAAGAGCAGAGGGTGAAAAGTGCTGCTGTTATTACAGATCTCAAGCCTCGTCCTGCAGAAAATGTGACGATTGAGAGGAGTGCAACAAATAGCTTTAGTCAAGAATATATTATTGGTGAAGGTTCTCTTGGTCGAGTTTACAAGGCTGATTTTCCAAATGGGAAGATAATGGCTGTTAAGAAGATTGACAACTCGGCACTGTCATTACAAGAGGAAGACAATTTTCTTGAAGCTGTTTCAAATATGTCACGCTTGCGGCATCCAAACATTGTTACACTGGCTGGGTACTGTGCAGAGCATGGCCAACGGCTTCTAGTTTATGAGTATATAGGAAATGGAAATCTGCATGACATGCTCCATTTTACTGAAGATAGTAGCAAGGCTTTATCTTGGAATGCCCGTGTACGCATTGCGCTTGGCACAGCTCGAGCATTAGAGTACTTGCATGAAGTGTGCTTGCCTTCTGTTGTTCATAGAAATTTCAAATCAGCAAATATATTACTTGATGAAGAGCTCAATCCTCACCTGTCTGACTGTGGTTTAGCTGCTCTGACACCAAATACTGAACGACAGGTATCAACTCAGATGGTTGGTTCATTTGGTTATAGTGCTCCTGAGTTTGCATTATCAGGAATATACACCGTAAAAAGCGATGTTTACAGCTTTGGGGTGGTTATGCTGGAGCTATTGACTGGTCGGAAGCCACTTGACAGTTCACGAGTTAGATCAGAGCAGTCACTTGTGAGGTGGGCTACACCCCAGCTTCATGATATAGATGCCTTGGCCAAAATGGTTGATCCTGCTTTGAACGGCATGTATCCTGCAAAGTCACTGTCACGCTTTGCTGATATCATTGCTCTCTGTGTTCAGCCTGAACCTGAATTTCGACCCCCCATGTCTGAGGTGGTGCAAGCATTGGTACGGTTAGTGCAAAGAGCAAGTGTGGTTAAAAGGCGACCCAGTGACGAATCTGGTTTTGGTCACAAGACCCCAGATCACGAGGCCATAGACATGTCATTTTAA 2100 0.4319 MLLSPATTMAHTRFPFSLFLAAFVSFYLIFVAIPLVLANTDPSDVQALGVMYNALNSSTQLTGWKIGGDPCGESWKGITCEGSAVVSIELSGLGLDGTLGYLLSDLMSLKKLDLSDNKMHDTIPYQLPPNLTSLNLARNNLSGNLPYSISAMASLNYLNVSNNALSQSIGDIFATLPDLGTVDLSFNNFSGDLPPSFGSLSNLSSLFLQKNQLTGSLDVLAGLPLDTLNVANNNFSGWIPRELKSIHNFIYDGNSFNDGPAPPSPTFTAPPPSGSHKSHHHSGSGSHNKTQGSDNENSDDHKGLTAGAVVGIILGSVLVAVILLLVLVFCIRKVKGKKKGARTSSGRIPPGITNVTPQMQEQRVKSAAVITDLKPRPAENVTIERSATNSFSQEYIIGEGSLGRVYKADFPNGKIMAVKKIDNSALSLQEEDNFLEAVSNMSRLRHPNIVTLAGYCAEHGQRLLVYEYIGNGNLHDMLHFTEDSSKALSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELNPHLSDCGLAALTPNTERQVSTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRFADIIALCVQPEPEFRPPMSEVVQALVRLVQRASVVKRRPSDESGFGHKTPDHEAIDMSF 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi62g00095 699 CDD STKc_IRAK 397 668 - -
Sebi62g00095 699 Gene3D Phosphorylase Kinase; domain 1 354 468 - -
Sebi62g00095 699 MobiDBLite consensus disorder prediction 271 292 - -
Sebi62g00095 699 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 469 679 - -
Sebi62g00095 699 ProSiteProfiles Protein kinase domain profile. 391 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi62g00095 699 Pfam Protein kinase domain 393 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi62g00095 699 SUPERFAMILY L domain-like 40 248 - -
Sebi62g00095 699 Pfam Leucine rich repeat N-terminal domain 42 80 IPR013210 -
Sebi62g00095 699 MobiDBLite consensus disorder prediction 260 300 - -
Sebi62g00095 699 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 358 468 - -
Sebi62g00095 699 SUPERFAMILY Protein kinase-like (PK-like) 379 665 IPR011009 -
Sebi62g00095 699 Gene3D Transferase(Phosphotransferase) domain 1 469 678 - -
Sebi62g00095 699 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 26 669 IPR046959 -
Sebi62g00095 699 Gene3D Ribonuclease Inhibitor 41 305 IPR032675 -
Sebi62g00095 699 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 41 267 - -
Sebi62g00095 699 Pfam Leucine rich repeat 129 189 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi62g00095 Sebi-Chr62 1032781 1038804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi62g00095 152 699 Strubbelig Receptor Gene Family AT4G22130 69.110 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Sebi62g00095 Pkinase 4.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi62g00095 - - aprc:113869285 1116.29