Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi62g00032 ATGAAGGTGATGGAAAAGCAAGAGCAGATGCATAAAGAATTGGTGGACATGATAGAGAACAGGGAAAAGGAAAGAATAAAGAGAGAAGAAGCATGGAAGCATGAGGAGATGGAAAGAATTAAAAAGGATGAAAAAGCTAGAGCTCAAGAAAGGTCTCGTAATTTAGCCCTCATATCATTCATTCAGAACCTATTGGGCCATGAAATTCAGATCCCTCAACCAGCAGAAGGAAGCAGCAAAAGAGAAGAGGATGAAGCTGAGGTGAACATTCAAAAAGATTTCAATTTCAACAGTGATCTAAGTAACAACAGATGGCCAGATGTTGAAGTACAAGCACTCATAACTGTGAGAACTTCATTGGACCACAAGTTTCGTCTCATTGGATCAAAAGGATCATCAATATGGGAAGAGATATCTGAAACAATGCATGGCATGGGATACAAACGTTCTGCAAAGAAGTGTAAGGAGAAATGGGAAAACATCAACAAGTACTATAAGAGGACAATGGGGAGCGGCAAGAAAAGGCGTCAAAATAGTAAAACTTGCCCTTACTTTGATGAGCTTGACATTCTTTATAGAAATGGGCTCCTCAATCATGGAAATACGTTGAGCAATACCAACAGTGTTCCCAATGTTGAAGAAAAGGAAAAGAGTGAAACTTGA 663 0.3922 MKVMEKQEQMHKELVDMIENREKERIKREEAWKHEEMERIKKDEKARAQERSRNLALISFIQNLLGHEIQIPQPAEGSSKREEDEAEVNIQKDFNFNSDLSNNRWPDVEVQALITVRTSLDHKFRLIGSKGSSIWEEISETMHGMGYKRSAKKCKEKWENINKYYKRTMGSGKKRRQNSKTCPYFDELDILYRNGLLNHGNTLSNTNSVPNVEEKEKSET 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi62g00032 220 ProSiteProfiles Myb-like domain profile. 97 162 IPR001005 -
Sebi62g00032 220 Gene3D - 105 167 - -
Sebi62g00032 220 PANTHER FI21293P1 2 214 - -
Sebi62g00032 220 CDD GT1 103 168 - -
Sebi62g00032 220 Coils Coil 4 24 - -
Sebi62g00032 220 FunFam Trihelix transcription factor GT-2 105 167 - -
Sebi62g00032 220 Pfam Myb/SANT-like DNA-binding domain 103 189 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi62g00032 Sebi-Chr62 332614 333276 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi62g00032 3 194 Trihelix Transcription Factor Family AT5G47660 43.902 5.91e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sebi62g00032 Myb_DNA-bind_4 6.8e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi62g00032 - - gmx:100820302 342.043