Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi62g00023 ATGGACAACTCCAAGATGTTCAACTATGGCAGCACCAGCGTGAGTGAGATAGAGGAAGAGAACTCCAACTCCTCACAGTTGTATTTGAATGATGGTCCTACTCCTATTCCTATTCCTATGGCAACCATTAGTGAAGAAGAGAATGAGGCTGAAGACACTGTTTATGTAGCAGTGGGTAAGAGTGACACTAGCATGGAAGCCCTGTCATGGACCCTCAATAACTTGGTTACTCCATCTACCTTTGTGTATCTCATACACGTTTTCCCAGAGATCAAGAACATTCCAAATCCTTTGGGAGTGGGAATGATCCCAAAGGAGCAAGTGAGTCCTGAGCAAGTGGAGAGCTATATGGCCCAAGAAAGAGGTAAGAGAAGAGAGCTCCTTCACAAGTTCCTCCAATCATGCTCTGCTTCCAAGGTTAAGGCGGACACCATCCTGATTGAGAGTGACTTCATTGCTAAGGCTATCATTGACCTGATTCCCATTCTTCAAATAAGAAAATTAGTGATTGGAGCCAACAAATCCCAATTAAGAAAACTAAGATCAAGGAAAGGGAATGGCATAGCTGATCAGGTACTTCAGAATGCACCAGAAAGTTGCAAGGTGAGAATTGTATGTGAAGGGAAGGAAGTGAATGAACAGATAGCTCGTGCCATTGCTAATGATAGTTCCATGTCCCAGAAAGAAGATCAGCAAAATGAATGGCTTTCATGTGCTTGTTTTAACTTTTAA 732 0.4276 MDNSKMFNYGSTSVSEIEEENSNSSQLYLNDGPTPIPIPMATISEEENEAEDTVYVAVGKSDTSMEALSWTLNNLVTPSTFVYLIHVFPEIKNIPNPLGVGMIPKEQVSPEQVESYMAQERGKRRELLHKFLQSCSASKVKADTILIESDFIAKAIIDLIPILQIRKLVIGANKSQLRKLRSRKGNGIADQVLQNAPESCKVRIVCEGKEVNEQIARAIANDSSMSQKEDQQNEWLSCACFNF 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi62g00023 243 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 53 202 - -
Sebi62g00023 243 CDD STK_N 53 208 - -
Sebi62g00023 243 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 10 242 - -
Sebi62g00023 243 Gene3D HUPs 43 217 IPR014729 -
Sebi62g00023 243 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi62g00023 Sebi-Chr62 239327 240901 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi62g00023 57 224 Plant U-box Gene Family AT5G57035 30.952 2.08e-16 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi62g00023 - - gmx:100781056 352.058