Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi62g00004 ATGCTCTATTCTTACACAAAGCACATCAATGGCTTTGCAGCTGTCCTAGAAGAGGAAGAGGCTGCGAACTTGCAAGACAACCTTGACACTGGTAAAGTTTTTGCTTTCCACTGCTTTGTTTTAGCTTATGGTGCATGGCCAGAATCTCCCAGCTTTAGTGATGATGGGATAGGACCCATTCCTTCAAGGTGGAAAGGAACCTGTGAGAATGATATCACTGGCTTCCGTTGTAACAGAAAGCTCATAGGGGCAAGGTACTTCAACAAAGGGTATGCTTCTTATTTAACTGAAGAGTCAGTGAGAAACAGTACTTTTAACTCAGCAAGAGACTATGAGGGTCATGGTTCTCACACTCTATCAACATTAGGAGGGAACTTTGTTGATGGAGCAAATGTCTTAGGCATGGGAAATGGAACTGCCAAAGGTGGTTCTCCTAAAGCCAGGCTTGCTACTTACAAGGTCTGCTGGCCACCAATTGATGACAATGAGTGCTTTGATTCTGATATCTTAGCAGCCTTAGATACAGCTATATCTGATGGGGTTGATGTTATTTCCCTTTCTATTGGAGGGTCTCCTATGGATTATTTCAATGATGCTATTGCTATTGGAGCATTTCATGCTACTATGAATGGTATCACTGTAGTATGTGCTGGTGGAAATTCTGGACCAGGACCTGGAACTGTCTCAAATACTGCACCTTGGATCATTACAGTTGGTGCAAGTACCTTGGACAGAAAGTTTGAGTCTATTGTTGAACTCTCCAATGGACAGGTTTTCAAGGGATATACTCTTTCAAATGCTGTGCCAGAAGACAAACTTTACCCACTCATTAGAGCTGATGTGGCCAAAAAGGATGAGGCGCAAGATTATGAAGCTGTGTTTTGTAAGGCAGGAACAATTGACCCAGAGAAGGCCAAGGGAAAAATATTGGTTTGTCTTAGAGGTGACAATGAAAGAGCAGAAAAGAGCCTTGTTGCTTTTGAGGCTGGTGCAGTTGGGATGATTCTTTACAATGATGAGTATACCCCTGAAGACTATAAGAACCCAATGGCATATTTGCATCCACCCAAAACCTTGTTGCAGATAAAGCCTTCTCCAACTATGGCATTTTTCTCCTCAAGAGGTCCCAACATTGTCACACCAGAGATCCTCAAGCCTGATATTACTGCTCCTGGTGTGAACATTATTGCTGCCTATTCACAAGGTACTAGCCCTTCAGATTTGGACTCTGATAACCGGAGGATTCCTTTTATCACCATGTCTGGAACATCCATGGCCACCCCTCATGTGGCTGGAGTTGTTGGTCTTCTCAAGACACTACACCCTAACTGGAGTCCAGCAGCTATCAAATCTGCAATAATGACAACTACTATGACATGGGACAACACTTTTAAACCAATGGTTGATGACAGTTTAGCTATGGCAACACCATATGACTATGGCACGGACACATCACACCAAATTGGGCAATGGATCCTGGTTTGGTCTATGATTAACATCACTGATTACCTAAACATGCTTTGTGCAAGTGGTTATAACCAAACTCAGATAGCAAGTTTCTATGGTGCTCCTTATAATTGTCCTTATGTGGTCAAAATCCTGGACTTCAACTACCCTGCAATAGTAATACCAAAACTCTATGGCACAGTTACTTTGACTAGGAGGGTTAAAAATGTTGGTAAACCAGGCATTTATGCAGCAAGGATCCGTGTACCACCAGGTCTTTCAGTATCTGTGGAGCCTAGGATCTTGAAATTTGACAGGATTGATGAAGAGAAAAGCTTTAGCTAA 1791 0.426 MLYSYTKHINGFAAVLEEEEAANLQDNLDTGKVFAFHCFVLAYGAWPESPSFSDDGIGPIPSRWKGTCENDITGFRCNRKLIGARYFNKGYASYLTEESVRNSTFNSARDYEGHGSHTLSTLGGNFVDGANVLGMGNGTAKGGSPKARLATYKVCWPPIDDNECFDSDILAALDTAISDGVDVISLSIGGSPMDYFNDAIAIGAFHATMNGITVVCAGGNSGPGPGTVSNTAPWIITVGASTLDRKFESIVELSNGQVFKGYTLSNAVPEDKLYPLIRADVAKKDEAQDYEAVFCKAGTIDPEKAKGKILVCLRGDNERAEKSLVAFEAGAVGMILYNDEYTPEDYKNPMAYLHPPKTLLQIKPSPTMAFFSSRGPNIVTPEILKPDITAPGVNIIAAYSQGTSPSDLDSDNRRIPFITMSGTSMATPHVAGVVGLLKTLHPNWSPAAIKSAIMTTTMTWDNTFKPMVDDSLAMATPYDYGTDTSHQIGQWILVWSMINITDYLNMLCASGYNQTQIASFYGAPYNCPYVVKILDFNYPAIVIPKLYGTVTLTRRVKNVGKPGIYAARIRVPPGLSVSVEPRILKFDRIDEEKSFS 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi62g00004 596 Gene3D - 507 596 - -
Sebi62g00004 596 ProSiteProfiles Serine proteases, subtilase domain profile. 1 504 - -
Sebi62g00004 596 SUPERFAMILY PA domain 288 406 IPR046450 -
Sebi62g00004 596 CDD Peptidases_S8_3 44 456 IPR034197 -
Sebi62g00004 596 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 595 IPR045051 -
Sebi62g00004 596 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 37 IPR037045 -
Sebi62g00004 596 SUPERFAMILY Subtilisin-like 43 470 IPR036852 GO:0004252|GO:0006508
Sebi62g00004 596 Gene3D Peptidase S8/S53 domain 41 243 IPR036852 GO:0004252|GO:0006508
Sebi62g00004 596 Gene3D Peptidase S8/S53 domain 361 481 IPR036852 GO:0004252|GO:0006508
Sebi62g00004 596 PRINTS Subtilisin serine protease family (S8) signature 421 437 IPR015500 -
Sebi62g00004 596 PRINTS Subtilisin serine protease family (S8) signature 110 123 IPR015500 -
Sebi62g00004 596 Gene3D - 346 360 - -
Sebi62g00004 596 Gene3D - 244 341 - -
Sebi62g00004 596 ProSitePatterns Serine proteases, subtilase family, serine active site. 422 432 IPR023828 -
Sebi62g00004 596 FunFam Subtilisin-like protease SBT1.5 38 257 - -
Sebi62g00004 596 Pfam Subtilase family 96 461 IPR000209 GO:0006508|GO:0008236
Sebi62g00004 596 Pfam Fibronectin type-III domain 535 595 IPR041469 -
Sebi62g00004 596 CDD PA_subtilisin_like 251 345 - -
Sebi62g00004 596 Pfam PA domain 294 346 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi62g00004 Sebi-Chr62 33524 36602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi62g00004 1 595 Subtilisin-like Serine Gene Family AT5G59810 52.266 0.0 660