Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi629g00024 ATGTCTCAGGGAAGAGGCAGTGCATTTTTACCTATGGTTATGGTCACTGTGATTTCACTACTGTGCTTGTTGGTTCTGGTGGAACGTGCTAATGCAGCAACTTACACCGTTGGAGGACCTGGGGGCTGGACCTTCAACACTGATACTTGGCCCAATGGAAAAAAGTTTAGAGCTGGTGATGTGCTAATCTTCAACTATGACTCAATGACACACAATGTGGTTGCTGTGGACAGAAGCGGATACAGCAGCTGCAATTCACCGGCAGGGGCTAAAGTGTTCAGTTCAGGGAAGGACCAAATCAGACTAGCCAGAGGACAGAACTACTTCATATGCAACTATCCTGGTCACTGCCAATCTGGTATGAAGGTTGCCATCAATGCAATATGA 387 0.4677 MSQGRGSAFLPMVMVTVISLLCLLVLVERANAATYTVGGPGGWTFNTDTWPNGKKFRAGDVLIFNYDSMTHNVVAVDRSGYSSCNSPAGAKVFSSGKDQIRLARGQNYFICNYPGHCQSGMKVAINAI 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi629g00024 128 CDD Plantacyanin 33 127 IPR041844 -
Sebi629g00024 128 FunFam basic blue protein-like 33 127 - -
Sebi629g00024 128 Pfam Plastocyanin-like domain 43 121 IPR003245 GO:0009055
Sebi629g00024 128 ProSitePatterns Type-1 copper (blue) proteins signature. 105 121 IPR028871 -
Sebi629g00024 128 SUPERFAMILY Cupredoxins 33 127 IPR008972 -
Sebi629g00024 128 ProSiteProfiles Phytocyanin domain profile. 33 128 IPR003245 GO:0009055
Sebi629g00024 128 Gene3D - 33 127 IPR008972 -
Sebi629g00024 128 PANTHER BLUE COPPER PROTEIN 27 126 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi629g00024 Sebi-Chr629 419583 420090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi629g00024 1 128 Phytocyanin Superfamily AT1G17800 40.876 5.68e-28 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi629g00024 - - gmx:100788635 233.032