Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi629g00023 ATGGAGGATTCTTCAGCTTCAGCAGGTGAAGACACCAATAAGAATACTTGTCCTCGTGGTCACTGGAGACCTGCTGAAGATGAAAAATTGAGGTGGTTCAATCAGCTTGATCCTAGAATTAACAGAAGACCATTCACGGAAGAGGAAGAAGAGAGGTTACTTGCAGCGCATCGTATTCATGGGAACAAGTGGGCACTGATAGCGAGGCTTTTCCCTGGTAGAACTGATAATGCTGTCAAGAATCACTGGCATGTCATAATGGCAAGAAAGCAAAGGGAACAATCCAAGTTATGTGGGAAGAGAACTTTCCAAGACGTTTATAATGATTATTCTTCTAACAACATCATCACTTCCTCCTCTATCTTCCCTGCTGATAAAAGATCACAGTTATTCACAACCGCAAGATCAATTGGCTCATTATTTTCAAACTGCTACAAGAGAGTTGTTCCAAGTCCTTTTGGATTCTTTGGTTCTTCTAATGCTGATGACAGAAGGATAAAGAGGGACTTGATGACTAGTTTATGTGATAACTCATCATCCACATTCACAAAGTTGATGAGGACTTCCACTGAGAAAAAAGATCAACAACAACAAGCAGATCATGATCAGAAGCCTAATATTGACCACAAAGAAGTTCCTTTCATTGATTTTCTTGGTGTTGGTGTCTCTTCTTCATGA 678 0.4027 MEDSSASAGEDTNKNTCPRGHWRPAEDEKLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGKRTFQDVYNDYSSNNIITSSSIFPADKRSQLFTTARSIGSLFSNCYKRVVPSPFGFFGSSNADDRRIKRDLMTSLCDNSSSTFTKLMRTSTEKKDQQQQADHDQKPNIDHKEVPFIDFLGVGVSSS 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi629g00023 225 Gene3D - 44 108 - -
Sebi629g00023 225 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 91 IPR017930 -
Sebi629g00023 225 SUPERFAMILY Homeodomain-like 25 93 IPR009057 -
Sebi629g00023 225 MobiDBLite consensus disorder prediction 1 22 - -
Sebi629g00023 225 CDD SANT 53 84 IPR001005 -
Sebi629g00023 225 ProSiteProfiles Myb-like domain profile. 37 87 IPR001005 -
Sebi629g00023 225 MobiDBLite consensus disorder prediction 187 210 - -
Sebi629g00023 225 FunFam MYB transcription factor 43 113 - -
Sebi629g00023 225 PANTHER MYB PROTEIN-RELATED 27 190 - -
Sebi629g00023 225 Pfam Myb-like DNA-binding domain 42 85 IPR001005 -
Sebi629g00023 225 SMART sant 41 89 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi629g00023 Sebi-Chr629 391027 392255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi629g00023 17 225 MYB Transcription Factor Family AT1G17950 42.231 1.26e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi629g00023 Myb_DNA-binding 1.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi629g00023 K09422 - qsa:O6P43_015084 208.379