Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi628g00023 ATGGATAATACAGATGATCTTTCGGCTGTTAAGTTGGATGATGAGAATGACCCTAGTTATGATGTTGGTCATGATGATAGTATTAGTGCAGATCCGTCGGATATTAGAGAAGAGAGCCAGGCTGCAGATATGGATGTTGGAGATGGGCAGTATAAGAGGATAACAAATTTGACCAGTGATGATGTAATGGGTTTGGAGTTTGTAACTCAATATGCTGCTTTCAAATTTTATGAGGATTATGCTAAAGCCCATGGTTTTGTAGTAAGGAAGGATGATATAAGGAAGGATTTCAGGGGTAATACTGTGATGCGACAATTTGTAAGCAATAGACAAGGATTGAGAAATAAAAAGCACTTCATGAGGGTAGACAGGAAAAGGGAGCACAGAGCAATAACCCGAACAAATTGTGGAGCTAAGCTTCGTGTATGTTTCAATCGCAAGAAATCAAAATGGATAGTGGTGTCTTTTGAGGAGGCACATAATCACGAGCTAACCCCTTCAGTATATGTGCATTTATATCCTGCTTATCGTAAAATGAGTGATGCAGATAAAGCTCAAGTTGATAGTTTACGTGCCCATGGTGTTAGAACTTGTCACATTATTGGTTACATGTTGGCCCAAAAAGGCGGATATGGGGGTTTGGGTTTTTGTAAAACAGATGTATACAACTATATTGACAGCAAAAGTCGTGTGCAGGTAAAAGATGGTGATGCAATTGCTGCTTTAAGCTATTTAGCAGAGGATTTCAAGACTGCAATGTATTCCAATTTCACCATAGAAGAATTTGAAGAATTTTGGAAGAAGATGTTGTTGAAACATGGTCTTCTAGTGTTGACAACCTGTTTGCAGAAAATTGAGAAAGAGGCTTCAAAGATTTACACTTTGGAGATGTTCAAAGAAGTTAGGCAGGAGATTGATAAGGCTGGTGCCTTAATTGTTGTTGACCGAAATGTTAATGAGAAGAAGTTTATGTTTACACTTAATCGGTATTGTAACCGTGGGCGTGAGACGCAAGTTTTGTATGATGCTTCGGATAGCTCTTTTTCATGTGATTGTAGACTTTTTGAAAGTCGTGGTATTCCATGCTCACATATATTTTGTGCCATGAAAAATGAGCATGTTGAATTCATTCCCACAAGTTTGATTTTGAAACGCTGGATGAAAACTGCCAAGAGTGATTTCATTAACTCTATTGAATCTAAGGAAGTCCATTCTGAAGTTTTGGATCGAGCTAGGTTGTCAGCCTTAACTTCTTATTCTTCTAATTTTGTTAAGGTTGCTTATGAAAATAAAGGGTGCTTCAATGAGATAGTGGATGATCTTTTTAAGCTGACTCTGAAGTATCAGAAGAAAACGGACTCTAATGGTCAAAATTCATCATCTTCATTCATTATTAGTGATCCGAATATCGTTAAAACAAAAGGTGCTCCGAAGAAGAAAAAGTATGCCAAAAAGAGGAGGAGACACTGTTCTAATTGCTCTGGAACAGGACACACAATTAGGACTTGTCCTAAGCTTGGCGGCTCAGATGTGAAGGGTGCTAATGATGACGAATTCTGTCCTTCAGAGTCTACTGACAGCAGTGGCACAAATGATAGTGATAAAGATGCATTTTCACGTGATTTGGCTAATGATCATCAATGTTCACAATCCAATAATGTCTCTAAGTCAAATGATAAGGAAGGAGAAGAAATTAAGAAAGAGTGGCCAAACTGA 1716 0.3805 MDNTDDLSAVKLDDENDPSYDVGHDDSISADPSDIREESQAADMDVGDGQYKRITNLTSDDVMGLEFVTQYAAFKFYEDYAKAHGFVVRKDDIRKDFRGNTVMRQFVSNRQGLRNKKHFMRVDRKREHRAITRTNCGAKLRVCFNRKKSKWIVVSFEEAHNHELTPSVYVHLYPAYRKMSDADKAQVDSLRAHGVRTCHIIGYMLAQKGGYGGLGFCKTDVYNYIDSKSRVQVKDGDAIAALSYLAEDFKTAMYSNFTIEEFEEFWKKMLLKHGLLVLTTCLQKIEKEASKIYTLEMFKEVRQEIDKAGALIVVDRNVNEKKFMFTLNRYCNRGRETQVLYDASDSSFSCDCRLFESRGIPCSHIFCAMKNEHVEFIPTSLILKRWMKTAKSDFINSIESKEVHSEVLDRARLSALTSYSSNFVKVAYENKGCFNEIVDDLFKLTLKYQKKTDSNGQNSSSSFIISDPNIVKTKGAPKKKKYAKKRRRHCSNCSGTGHTIRTCPKLGGSDVKGANDDEFCPSESTDSSGTNDSDKDAFSRDLANDHQCSQSNNVSKSNDKEGEEIKKEWPN 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi628g00023 571 ProSiteProfiles Zinc finger SWIM-type profile. 335 373 IPR007527 GO:0008270
Sebi628g00023 571 MobiDBLite consensus disorder prediction 514 571 - -
Sebi628g00023 571 SMART 26again6 348 375 IPR006564 GO:0008270
Sebi628g00023 571 MobiDBLite consensus disorder prediction 1 43 - -
Sebi628g00023 571 PANTHER OS01G0519700 PROTEIN 283 487 - -
Sebi628g00023 571 MobiDBLite consensus disorder prediction 557 571 - -
Sebi628g00023 571 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Sebi628g00023 571 MobiDBLite consensus disorder prediction 1 44 - -
Sebi628g00023 571 MobiDBLite consensus disorder prediction 474 494 - -
Sebi628g00023 571 MobiDBLite consensus disorder prediction 475 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi628g00023 Sebi-Chr628 388892 391500 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi628g00023 FAR1 5.2e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi628g00023 - - ccaj:109792835 303.138