Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi628g00009 ATGAAAACTCTCTGCCACCAGCTTGCTTCTCTTATCCCTTCCAACCATAAACCATCCAAATCCAAGTACATGGTAGCGCAGCAAGACCAGCTGGATCTGGCAGCGAGGTATATAAAGCATATGAGAGAAAGAATAGATAAATTAAAGAGGCAGAAGGAGGAAGCTGTAAGGTCAAACCAAACCGATAAAATGTTCAATATTGAGTCAAAATTGCCAGTACTTGAGTTAAGAGACTTGGGTTCCGGCATTCAAGTTATGTTGGTGAGTGGGTTGAACAACAAGACCTTCATGTTATACGAAGTAATTAGTGTCCTTGAGGAAGAAGGCGCTGAAGTCGTCAATGCTAGCTTCTCAACCGTTGGGGATAAAATTTTTTACACTGTACATGCTCAGGTTAAAATATCAAGACTGGGTGTAGAAACGGCGAGGGTATATGAGAGGCTTCAGGAGTTTATTGCCCCACTAGAAAGCTGCTGGGAGGACGTTTGA 489 0.4274 MKTLCHQLASLIPSNHKPSKSKYMVAQQDQLDLAARYIKHMRERIDKLKRQKEEAVRSNQTDKMFNIESKLPVLELRDLGSGIQVMLVSGLNNKTFMLYEVISVLEEEGAEVVNASFSTVGDKIFYTVHAQVKISRLGVETARVYERLQEFIAPLESCWEDV 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi628g00009 162 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 150 - -
Sebi628g00009 162 Coils Coil 31 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi628g00009 Sebi-Chr628 149554 150457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi628g00009 1 152 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 32.530 3.29e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi628g00009 - - gmx:100790403 238.039