Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi628g00008 ATGGATAAAATGAAGCAGAAAGATGAGGATGGTTCTGATGATCATGCTCGTCACTCAACCTCTATTTCCACTTCCATTAAATTCAAAAGTGTAGCAGCACCTCCTCCTCCTGCTGCTGCTGCTATCTTCAAGAAGCAAAGAGAAGACTGGGAAATTGACCCTTCCAACCTTATCATCAAAAGTGTCATAGCTCGTGGCACTTTTGGCACTGTCCATCGTGGTATCTATGATGGCCAAGATGTTGCTGTCAAAATGCTGGACTGGGGTGAAGAAGGGCACCGGACAGAAGCTGAAATTGCTGCCCTCAGGTCAGCTTTTACACAAGAAGTTGTTGTTTGGCATAAACTTGAACATCCTAATGTCACTAAGTTTTCAGGGTTTTATACTTACATGAGTAGTCCGCTCTTCCCCCCACCTTCCTGGTTTCTCTTGACTTATGTTCAGCTTGAATTTGCAGGAAATTAG 465 0.4387 MDKMKQKDEDGSDDHARHSTSISTSIKFKSVAAPPPPAAAAIFKKQREDWEIDPSNLIIKSVIARGTFGTVHRGIYDGQDVAVKMLDWGEEGHRTEAEIAALRSAFTQEVVVWHKLEHPNVTKFSGFYTYMSSPLFPPPSWFLLTYVQLEFAGN 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi628g00008 154 FunFam Kinase suppressor of Ras 1 46 135 - -
Sebi628g00008 154 MobiDBLite consensus disorder prediction 1 17 - -
Sebi628g00008 154 Pfam Protein tyrosine and serine/threonine kinase 59 130 IPR001245 GO:0004672|GO:0006468
Sebi628g00008 154 ProSiteProfiles Protein kinase domain profile. 57 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi628g00008 154 MobiDBLite consensus disorder prediction 1 33 - -
Sebi628g00008 154 SUPERFAMILY Protein kinase-like (PK-like) 43 132 IPR011009 -
Sebi628g00008 154 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 34 129 - -
Sebi628g00008 154 Gene3D Phosphorylase Kinase; domain 1 39 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi628g00008 Sebi-Chr628 83890 85405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi628g00008 44 126 MAP Kinase Kinase Kinase AT3G01490 84.337 7.36e-48 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sebi628g00008 PK_Tyr_Ser-Thr 7.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi628g00008 - - gmx:100791455 195.282