Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi628g00007 ATGGGATCTTCAGAATTACAGATACAAACTGATAGTGGTCTAATTAGCATGCCAAGCAATATCTGCTGTGTAGTTGTAGAGTATCTTGCTGGAGGTGCGCTGAAATCTTACTTAATAAAGAATAGGAGGAGGAAGTTAGCTTTTAAGGTTGTCATCCAGCTGGCACTTGATCTTGCAAGAGGGCTGAGTTATCTTCACTCTCAGAAAATTGTCCACAGAGATGTAAAGACAGAGAACATGCTGTTGGACAAGACACGCACAGTTAAAATTGCTGATTTTGGGGTTGCACGTGTTGAAGCCTCAAATCCCAATGACATGACTGGGGAGACTGGTACACTTGGTTACATGGCTCCTGAGGTTCTAAATGGCAACCCCTATAACAGGAAATGTGATGTGTACAGTTTTGGCATCTGTTTATGGGAAATATATTGTTGTGACATGCCATATCCTGACCTAAGTTTCTCAGAGATTACTTCAGCTGTTGTTCGCCAGAATCTGAGACCAGAAATACCACGATGTTGCCCAAGTTCTCTGGCAAATGTAATGAAGAGATGCTGGGATGCTAATCCTGATAAACGGCCTGAAATGGATGAGGTAGTTTCCATGCTGGAGGCTATTGACACATCCAAGGGTGGAGGTATGATCCCTGATGATCAGCAGCAAGGTTGTCTTTGCTTTCGTAAGCACAGAGGGCCGTGA 699 0.4363 MGSSELQIQTDSGLISMPSNICCVVVEYLAGGALKSYLIKNRRRKLAFKVVIQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEITSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPDDQQQGCLCFRKHRGP 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi628g00007 232 FunFam Serine/threonine-protein kinase HT1 29 214 - -
Sebi628g00007 232 Pfam Protein tyrosine and serine/threonine kinase 19 203 IPR001245 GO:0004672|GO:0006468
Sebi628g00007 232 Gene3D Transferase(Phosphotransferase) domain 1 12 210 - -
Sebi628g00007 232 ProSitePatterns Serine/Threonine protein kinases active-site signature. 70 82 IPR008271 GO:0004672|GO:0006468
Sebi628g00007 232 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 19 207 - -
Sebi628g00007 232 SUPERFAMILY Protein kinase-like (PK-like) 19 203 IPR011009 -
Sebi628g00007 232 PRINTS Tyrosine kinase catalytic domain signature 174 196 IPR001245 GO:0004672|GO:0006468
Sebi628g00007 232 PRINTS Tyrosine kinase catalytic domain signature 26 39 IPR001245 GO:0004672|GO:0006468
Sebi628g00007 232 PRINTS Tyrosine kinase catalytic domain signature 64 82 IPR001245 GO:0004672|GO:0006468
Sebi628g00007 232 PRINTS Tyrosine kinase catalytic domain signature 130 152 IPR001245 GO:0004672|GO:0006468
Sebi628g00007 232 SMART serkin_6 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi628g00007 232 CDD STKc_MAP3K-like 20 203 - -
Sebi628g00007 232 ProSiteProfiles Protein kinase domain profile. 1 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi628g00007 232 PIRSF ILK 15 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi628g00007 Sebi-Chr628 80763 82054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi628g00007 1 232 MAP Kinase Kinase Kinase AT3G22750 75.107 1.05e-137 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Sebi628g00007 PK_Tyr_Ser-Thr 9.6e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi628g00007 - - gmx:100791455 468.003