Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi627g00014 GTATCAAATGCCTACCTCAAGTTTCTGCTGGGATCAGGTGCCAAAATGTTGTTTGAGTTTGTAAAGGAAATGCCAAAACCTGAGACCGCAATTAACTTTGATTTGGCTTCTCTTCTGGGCGGTCTCTTCTTTACATGGGTCATCCTGCAACTTTTCCCTGTTGTCCTGACATCCCTAGTTTATGAGAAGCAGCAGAAATTAAGAATCATGATGAAAATGCATGGTCTTGGGGATGGGCCATATTGGATGATTTCATATGGTTATTTCCTTGCCATATCAGTTATATACATGTTGTGTTTTGTGATATTTGGCTCTGTCATAGGGTTAAAATTCTTCACGATGAATGACTACAGCATCCAATTCGTGTTTTATTTCATCTATATAAATTTACAAATTTCGCTGGCATTTCTATTGGCTACCCTGTTTTCAAATGTTAAGACCGCTACAGTAATTGCATATATTGGTGTGTTTGGAACTGGGCTATTAGGTGGCTTTCTTTTCCAATTTTTTCTTCAAGATACATCATTTCCAAGAGGGTGGATCATTGTTATGGAGTTGTTTCCTGGGTTTGCTTTATACCGGGGGTTATATGAATTTTCTGAATCTTCCTTCAACGGGGATGCTTTGGGGACTAATGGTATGCGGTGGGGAGATCTGAGTGATAGCACAAATGGCATGAAAGAGATCTTAATTATCATGTTCGTGGAGTGGCTATTGGTTCTATTTTTCGCTTATTACATCGATCAAGTTCTGTCATCAGGAAGCGGGAAAAGTCCTCTTTTTTTCTTGAAAAGATTTCAGAAAAAGCGCAGCTCATCTTTTCGGAAGCCTAGCATCCAGAGGCAGGGATCTAAAGTTTTTGTTCAGATGGAGAAACCTGATGTTAATCAAGAGAGGGAGAAGGTGGAGCAGCTGCTACTAGAACCAACTATTAATCATGCAATTGTATGTGACGACCTGAGAAAGATCTATCCGGGGACAGATGGTAACCCAGAGAAATTTGCAGTGAGAGGGTTGTCCCTTGCCTTGCCTCAAGGGGAGTGTTTTGGTATGCTTGGTCCGAATGGTGCTGGGAAGACTTCTTTTATCAATATGATGATTGGTCTCACGAAGCCAACCTCTGGTACAGCATTTGTTCAAGGTCTTGACATAAGAACTGACATGGACGGAATATATACTAGCATGGGTGTATGCCCCCAGCATGACTTGCTGTGGGAAAATTTGACAGGAAGAGAGCACCTGCTCTTCTATGGCAGACTAAAAAATCTTAAAGGTTCAGCCTTAACACAAGCGGTGGAAGAATCTTTAAAAAGTGTAAATCTTTTTCATGGAGGAGTTGCTGATAAACAAGCTGGAAAATATAGTGGAGGAATGAAGAGGAGGCTTAGTGTTGCAATTTCATTGATTGGAGATCCTAAAGTTGTTTATATGGATGAGCCGAGTACTGGATTAGACCCTGCATCAAGAAACAACTTATGGAATGTTGTTAAGCGTGCAAAACAGGATCGTGCAATCATTCTCACCACACATTCCATGGAAGAGGCAGAAGTCCTATGTGATCGATTAGGGATATTTGTAGATGGTAGCTTGCAGTGCATAGGAAATCCAAAGGAGCTGAAAGGCAGATATGGAGGAACTTATGTGTTCACGATGACAACATCTTTGGATCATGAAAAGGATGTAGAGAATTTGGTGCAGAAGCTCTCCCCAAATGCTAACAAGATTTACCATATCTCTGGTACCCAGAAGTTTGAACTGCCAAAAGACGAGGTTAAAATAGCGAATGTATTCCGAGCTGTTGAAACTGCAAAAAGAAATTTCACAGTTTCTGCGTGGGGTTTAGCTGATACCACATTGGAAGATGTCTTCATTAAGGTTGCACGCGGGGCTAAGGCATTTGACACCTTGTCATAA 1914 0.4112 VSNAYLKFLLGSGAKMLFEFVKEMPKPETAINFDLASLLGGLFFTWVILQLFPVVLTSLVYEKQQKLRIMMKMHGLGDGPYWMISYGYFLAISVIYMLCFVIFGSVIGLKFFTMNDYSIQFVFYFIYINLQISLAFLLATLFSNVKTATVIAYIGVFGTGLLGGFLFQFFLQDTSFPRGWIIVMELFPGFALYRGLYEFSESSFNGDALGTNGMRWGDLSDSTNGMKEILIIMFVEWLLVLFFAYYIDQVLSSGSGKSPLFFLKRFQKKRSSSFRKPSIQRQGSKVFVQMEKPDVNQEREKVEQLLLEPTINHAIVCDDLRKIYPGTDGNPEKFAVRGLSLALPQGECFGMLGPNGAGKTSFINMMIGLTKPTSGTAFVQGLDIRTDMDGIYTSMGVCPQHDLLWENLTGREHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADKQAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRNNLWNVVKRAKQDRAIILTTHSMEEAEVLCDRLGIFVDGSLQCIGNPKELKGRYGGTYVFTMTTSLDHEKDVENLVQKLSPNANKIYHISGTQKFELPKDEVKIANVFRAVETAKRNFTVSAWGLADTTLEDVFIKVARGAKAFDTLS 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi627g00014 637 ProSitePatterns ABC transporters family signature. 454 468 IPR017871 GO:0005524|GO:0016887
Sebi627g00014 637 Gene3D - 307 580 IPR027417 -
Sebi627g00014 637 CDD ABC_subfamily_A 319 540 - -
Sebi627g00014 637 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 281 631 IPR026082 GO:0016020|GO:0055085|GO:0140359
Sebi627g00014 637 FunFam ABC transporter A family member 7 304 580 - -
Sebi627g00014 637 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 315 552 IPR003439 GO:0005524
Sebi627g00014 637 SMART AAA_5 345 528 IPR003593 GO:0016887
Sebi627g00014 637 Pfam ABC-2 family transporter protein 34 245 IPR013525 GO:0016020|GO:0140359
Sebi627g00014 637 Pfam ABC transporter 337 481 IPR003439 GO:0005524
Sebi627g00014 637 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 314 543 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi627g00014 Sebi-Chr627 469338 475055 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi627g00014 324 563 Calmodulin-binding Proteins AT2G36910 23.320 6.72e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi627g00014 - - gmx:100805474 1167.53