Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi627g00011 ATGGGAAAATCACCAGGAAAATGGATCAAAACTGTACTATTTGGGAAAAAGTCATCCAAATCAAATATTTCAAAAGGAAGAGAGAAGCTTGTTAATAAAAAGGAAGCAGTGTTTGCTTCTAATGTGTCGGATAATGGTTTGGCTTTAGAGCCAACCCTTGATAAGATTGCCAGACATGAGGAGGACCTAGAACAGGAGAATAAAGAATCAGAAAACCTTTTACCTGGGAATCAAGAAGTAGACAACATTGGATCTGTTGACCAAGATGCACCACCTGATCCGGAGAAAATCAGGCTGGAAGAAGCAGCAACAAAAGCACAGGCTGCTTTCAGGGGTTACTTGGCTCGCAGGGCATTTAGGGCTCTAAAAGGCATAATAAGGTTGCAAGCACTTATCCGTGGGCATTTGGTTAGGAGACAAGCTGTTGCTACATTATGCTGTATGTATGTGATTGTAAGGTTACAGGCACTTGTTCGTGGAGGGAGCGTTAGACAGTCCAATATTGGATTTGAAATCCATAAGAAGTGCAATCTATTTAAGCCTTTGGATTGCAAACTTGGTGAGTCAGTTCGCATTTCCACAAAAATTTCGAAACTGTCAGGAAATACTTTCATCTGTAAGCTTCTTTCTTCATCAACTACAATAATGGCCCTGCACCTGCAATATGTTGGTGGGGATCCAAATTCAGTCTTAAGTTGGTTGGAGCGCTGGTCAGCATCGTACTTTTGGAAACCAGTTCCCCAACCCAAGAAAATTCGAGACTCTAAATCTCAGAGAAAGCAGGGTAATATTTCAATCGGAGAAGTTCAAATTAGCAAGTCAAAACGTACCAACAGGAAGCTTCCGATTGCAAATTTCGAATCAGTCCCAGTGCAAACAAATCCTGAACTTGAGAAACCAAAACGTAATTTCAGGAAAATCAGCCAACCGTCAGATCCAGAGCAGGAAAATCCACAGAGTGAGCTTGAAAAGGTTAAACGTAACTTGAGAAAGATTCATAACCCTGTTGTTGAGAATGTTATTCTGTCAGAAGTTGAATGTGAGACCCCGAAGCCGCATTTGGAAAAGGCAACAGTTATTGCAGATGATGCTGTTTCAGAACCGGTTGTCAATACAACTAATGAAAAGATCAAGAAGGAAGCTACATTGATCATCTCCAATGTACCTGATGTAGAAATTACTCCAAGACCGTCAGATAACAAGGAGGTGTCTGATATTCCAAGCAGTGATCAAATGCCTATAGAATCAATGCCCTTGACAGAGACTACAACTAAAGAGAAAAACACTTCTGGTGACATAGTTAAAAATGAGCCAATCAATCTACCAGAGACTATCTTTAAAGATGAAAACTCTCCATTAACAAATGGAGATTTGACTCATAAGGAAGGTCTAACAGGTAATGAAAACCAGAAATCTACCCGGAAAGCCTCAATTTTGGCAAAGCAGGAGCATGCAGAGAATGGTTTACAGAATAGTCCAACAATACCAAGTTATATGGCAGCAACTGAATCTGCCAAGGCAAAATTGAGGACACAAGGGTCCCCGAGGTTTGGGCAAGATGAAAGTGAGAGAATCAACTCTGCTGGGCGACACTCTCTGCCATCTTCAACTAACAGTAAAATTAGTTCACACTCACCTAGGACAAACAGATCAGTTCAAGCAGGTGGCAAAGGGGGCCATAGAAGTGACAAAACTGCACCGTCTTCTAGAGGTGGGAATGGGAAGGTTATTCAAGCAGAGTGGAGGAGCATCACTCACCCAACCCACCTTCATCCACCACATCTCCATCCAACCAATAGCAAACCAAGTCGCTCACCTCATCATCGGAACCATGGCATTCGACCATATGTCATTAATCGACCATATGTCATTAATCACCGTGCTTGTGGAACTATCAAAAACCTAGTTGCCGTCACCACCCAAAGAGAGACATCTGAGAGATGA 1944 0.4203 MGKSPGKWIKTVLFGKKSSKSNISKGREKLVNKKEAVFASNVSDNGLALEPTLDKIARHEEDLEQENKESENLLPGNQEVDNIGSVDQDAPPDPEKIRLEEAATKAQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQAVATLCCMYVIVRLQALVRGGSVRQSNIGFEIHKKCNLFKPLDCKLGESVRISTKISKLSGNTFICKLLSSSTTIMALHLQYVGGDPNSVLSWLERWSASYFWKPVPQPKKIRDSKSQRKQGNISIGEVQISKSKRTNRKLPIANFESVPVQTNPELEKPKRNFRKISQPSDPEQENPQSELEKVKRNLRKIHNPVVENVILSEVECETPKPHLEKATVIADDAVSEPVVNTTNEKIKKEATLIISNVPDVEITPRPSDNKEVSDIPSSDQMPIESMPLTETTTKEKNTSGDIVKNEPINLPETIFKDENSPLTNGDLTHKEGLTGNENQKSTRKASILAKQEHAENGLQNSPTIPSYMAATESAKAKLRTQGSPRFGQDESERINSAGRHSLPSSTNSKISSHSPRTNRSVQAGGKGGHRSDKTAPSSRGGNGKVIQAEWRSITHPTHLHPPHLHPTNSKPSRSPHHRNHGIRPYVINRPYVINHRACGTIKNLVAVTTQRETSER 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi627g00011 647 Gene3D - 97 146 - -
Sebi627g00011 647 MobiDBLite consensus disorder prediction 248 322 - -
Sebi627g00011 647 ProSiteProfiles IQ motif profile. 123 145 IPR000048 GO:0005515
Sebi627g00011 647 SMART iq_5 98 120 IPR000048 GO:0005515
Sebi627g00011 647 SMART iq_5 121 142 IPR000048 GO:0005515
Sebi627g00011 647 MobiDBLite consensus disorder prediction 587 613 - -
Sebi627g00011 647 PANTHER IQ-DOMAIN 5-RELATED 1 541 - -
Sebi627g00011 647 MobiDBLite consensus disorder prediction 528 552 - -
Sebi627g00011 647 MobiDBLite consensus disorder prediction 502 574 - -
Sebi627g00011 647 MobiDBLite consensus disorder prediction 70 84 - -
Sebi627g00011 647 MobiDBLite consensus disorder prediction 393 414 - -
Sebi627g00011 647 MobiDBLite consensus disorder prediction 445 476 - -
Sebi627g00011 647 Coils Coil 49 73 - -
Sebi627g00011 647 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Sebi627g00011 647 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Sebi627g00011 647 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Sebi627g00011 647 MobiDBLite consensus disorder prediction 259 292 - -
Sebi627g00011 647 MobiDBLite consensus disorder prediction 447 476 - -
Sebi627g00011 647 Pfam Protein of unknown function (DUF4005) 481 562 IPR025064 -
Sebi627g00011 647 MobiDBLite consensus disorder prediction 62 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi627g00011 Sebi-Chr627 414043 421844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi627g00011 1 580 IQD Protein Family AT1G74690 44.444 1.80e-125 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi627g00011 - - gmx:100786022 858.211