Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi626g00030 ATGGCCTCTTCGATCATATTCCCTCTTTTTCTTTTCCTTTCCCTATGTCAACATTCATCATCATTCTCCCTCTCCGTCGAGAAACTTAATGAAGACATTATAGTCTCATCACCCAAACGCACATTCACTGCAGGCTTTTATCCCGTAGGGGAAAATGCTTACTCATTCGCCATATATTTCACCCAATCCCATAGAAACCTCCAGAATGCCACCGTTGTTTGGATGGCAAACCGTGACCAACCAGTCAACGGAAAAAGCTCAACACTTTCCCTTCTCAAGACAGGTAACCTCGTCTTAACCGACGCAGGACAGTTCAACGTTTGGTCCACAAACACTGTCTCATCCAAACCACTTGAGTTGAATTTGTATGACACAGGGAATCTCATTCTCCGAGAGCAGAACATTTCTGGTTCTGTTCTATGGCAGAGCTTCGACTTCCCAACAGATACACTTCTTCCTGATCAAACTCTCACCAGGTTCACCAACCTTGTTTCCTCCAAAAGCCAGACCAACTATTCCTCTGGTTTCTATAAGCTGTTCTTCGACAACGACAATATTCTCCGTCTACTTTACGATAGCCCTCGAGTTTCAAGCGTTTATTGGCCAGATCCTTGGCTTGTGAGCTATCAAGTTGGTAGATCCACATACAACAATAGCAGAATTGCAGTGCTAGATAGTTTGGGGGAATTCAGTTCTTCTGATCATTTCACTTTAAGGATATCTGATTATGGGACAGTGCTCCAACGAAGATTGACCCTTGATCATGATGGGTCGATAAACAAGACTGGTCTCAAGGTTGCAAACCAAACTTCCAGCTTTCATGTACCAACAAGTCTGAGTCACGCTTCCAATACTTACCCAATGTCGATTTTTATGGATATGACTATGGGTACTATCAAAATTACACCTATCAACAATGATAACCCCATGGAAGATAATGGCTTGGTTTGTTTGAGAAATGCAGCAAAACAACTAGAAAGGTCATATGTCAAAGGCAAAGAAAATGGATCGGTGAAGTTCTTCATGCTTTGGTTTGCGACTGGCTTGGGAGGAGTTGAGCTCGTGTGCTTCCTTTTGGTGTGGTGTTTCTTATTTAAGAATACTAGCAAACACTTGGGTACAGACACACAAGGGAATGTTCTTGAAGCAGCTACGGGATTTCGGAAATTCAGTTACTCTGAACTGAAACAAGCTACAAAAGGTTTCAGCCAAGAGATTGGAAGGGGTGGTGGAGGAATTGTGTATAAAGCTGTGTTATCAGATAACCGAGTTGCCGCAATAAAGCGATTGTATGATGCAAACCAAGGAGAGAGTGAGTTTCTTGCAGAAGTAGGCATCATTGGAAGGCTTAACCACATGAACTTAATTGGCATGTGGGGTTATTGTGCAGAGGGAAAGCACAGGTTGTTGGTGTATGAGTACATGGAAAATGGTTCTTTAGCTCACAATCTCTCATCAAATGCACTTGATTGGAGTAAGAGGTATAACATTGCTCTGGGAACAGCAAGGGGTTTGGCCTATTTACATGAAGAATGCTTGGAGTGGATTTTGCACTGTGATATAAAGCCACAGAACATACTTCTTGATTCTGATTATCAACCCAAGGTTGCGGATTTTGGATTGTCTATGCTTCTACATCGGAATAATGTGAACAAATCAAGCTTCTCAAGGATAAGAGGAACAAGGGGTTACATGGCACCGGAATGGGTTTTCAACTTGCCAATCACTTCCAAGGTGGATGTTTATAGCTATGGAATTGTTCTCTTGGAGATTATAACTGGAAGGAGCCCAACAACAGGTGTCCAAATCACAGATGGCACAGAGTCACATCACGAGAGGTTGGTAACATGGGTGAGGGAGAAAAAGAGGAAAGGATCAGAAGGGGCATCTTGGGTGGAACAAATCGTTGACCCTGCTTTGGGATCAAATTATGACATGAATAGAATGGAGACATTGGCAACGGTGGCTTTGGATTGTGTAGAGGAAGAGAAAGACCTCAGACCCAGCATGAGCCAAGTTGCTGAGAGGCTCCAAAGTCATGAACATGATTTGTAG 2055 0.4297 MASSIIFPLFLFLSLCQHSSSFSLSVEKLNEDIIVSSPKRTFTAGFYPVGENAYSFAIYFTQSHRNLQNATVVWMANRDQPVNGKSSTLSLLKTGNLVLTDAGQFNVWSTNTVSSKPLELNLYDTGNLILREQNISGSVLWQSFDFPTDTLLPDQTLTRFTNLVSSKSQTNYSSGFYKLFFDNDNILRLLYDSPRVSSVYWPDPWLVSYQVGRSTYNNSRIAVLDSLGEFSSSDHFTLRISDYGTVLQRRLTLDHDGSINKTGLKVANQTSSFHVPTSLSHASNTYPMSIFMDMTMGTIKITPINNDNPMEDNGLVCLRNAAKQLERSYVKGKENGSVKFFMLWFATGLGGVELVCFLLVWCFLFKNTSKHLGTDTQGNVLEAATGFRKFSYSELKQATKGFSQEIGRGGGGIVYKAVLSDNRVAAIKRLYDANQGESEFLAEVGIIGRLNHMNLIGMWGYCAEGKHRLLVYEYMENGSLAHNLSSNALDWSKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGLSMLLHRNNVNKSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVLLEIITGRSPTTGVQITDGTESHHERLVTWVREKKRKGSEGASWVEQIVDPALGSNYDMNRMETLATVALDCVEEEKDLRPSMSQVAERLQSHEHDL 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi626g00030 684 PANTHER OS07G0415500 PROTEIN 301 680 - -
Sebi626g00030 684 CDD B_lectin 36 147 IPR001480 -
Sebi626g00030 684 Gene3D - 24 145 IPR036426 -
Sebi626g00030 684 FunFam Serine/threonine-protein kinase 475 684 - -
Sebi626g00030 684 Pfam D-mannose binding lectin 71 159 IPR001480 -
Sebi626g00030 684 CDD STKc_IRAK 406 678 - -
Sebi626g00030 684 SMART serkin_6 400 679 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi626g00030 684 Pfam Protein kinase domain 403 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi626g00030 684 ProSiteProfiles Protein kinase domain profile. 400 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi626g00030 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 516 528 IPR008271 GO:0004672|GO:0006468
Sebi626g00030 684 ProSitePatterns Protein kinases ATP-binding region signature. 406 428 IPR017441 GO:0005524
Sebi626g00030 684 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 202 IPR036426 -
Sebi626g00030 684 FunFam Putative receptor protein kinase ZmPK1 13 146 - -
Sebi626g00030 684 ProSiteProfiles Bulb-type lectin domain profile. 20 143 IPR001480 -
Sebi626g00030 684 FunFam S-receptor-like serine/threonine-protein kinase 369 474 - -
Sebi626g00030 684 SMART blect_4 26 147 IPR001480 -
Sebi626g00030 684 Gene3D Phosphorylase Kinase; domain 1 365 474 - -
Sebi626g00030 684 SUPERFAMILY Protein kinase-like (PK-like) 383 678 IPR011009 -
Sebi626g00030 684 Gene3D Transferase(Phosphotransferase) domain 1 475 683 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi626g00030 Sebi-Chr626 497044 499436 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi626g00030 390 681 Trihelix Transcription Factor Family AT5G38560 44.295 4.58e-70 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sebi626g00030 Pkinase 2.1e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi626g00030 - - jre:108984953 779.63