Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi626g00013 ATGGGTATGTTTTCTTTTGGAATTTTGTCAAATCAGACTTTGTCATCTCCAACAACTGGAGCATTTGGCAATCAAGGCTTCAATCACCACAATGTTAAGGAAGAAGACAAAAGCTTCTCAACTTTCTCCTTCCAAACCCAATCACAGCCTTCTCTTTCATCCACAGCTGGATTTCAATCTTCAACAGGCATTGCTCAAACTGGATGGAGTTTTCAGGAAACGGATAGGTTTTCTGGTAGAATGAACATGAGTGTGGTGAAAACTGAAGGCTCTTCTTCTATACAGAGTTTCACCCCTGAGAATGTTGCTAGTGCACAAAATAACTACAAGAGTGGTTTGCAATCTGATAACAACAATTACCACCCACAAATTCAGACCTTAAACAAAAGGTCAGATGATGGGTACAATTGGAGGAAATATGGGCAAAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGCTACTACAAATGCACATACCCCAATTGCCCAACAAAGAAAAAAGTTGAGAAGTCTTTAGAAGGGCATGTTACTGAGATAGTTTACAAAGGTACTCATAACCATCCAAAGCCTCAGGCTACAAGGAGGAACTCATTGTCTGGATCATCACTTGCAATTCCTCCTTTAAATCATGTCAGCAATGAAATACCAGATGCCACTCATGGCAATGGACACATGGATTCGGTTGCCACACCTGATAACTCATCAATATCAATGGGAGATGATGATTTTGAGCAGAGTTCCCAAAAGAGTAAATCAGGAGAGGACTTTGATGAAGATGAACCTGGTGCCAAAAGATGGAGAATAGAAGGTGAAAATGAGGGAATATCAGCAGCTGGAAGTAGAACAGTGAGAGAACCCAGAGTTGTGGTTCAGACAACCAGTGAAATCGATATCCTAGATGATGGGTACAGATGGAGGAAATATGGGCAAAGTAGTAAAGGGAAATCCAAATCCAAGTTTGGTCAGAATCCCATCATAGAGTTCTTAATTACCTCCAATGCTAGTAATCATAAATGCATGATGCTTACTTTTGTTGGAATTCTACAGAGTTACTACAAGTGCACAAACCCAGGATGTCCAGTGAGAAAGCATGTAGAGAGAGCCTCAAATGACTTAAAGGCAGTGATCACAACCTATGAAGGAAAGCACAATCATGATGTCCCTGTGCCACGTGGCAGTGGCTGCCAATCTGTTAACAGACCACTGCCAACCAATGCCACAAACAACACCATGAGTTCAGCCCCTGTGACTCAATACACTAACAATTCAGTCAACAATTCTCTTCAAAGTTTTAGACCACCAGAAGGGCAAGCACTCTTCACCCCTGAGATGCTGGAGAGCCCTGGAGGCTTTGGATTCCAGGGTTTGGGAATCCAATGGAATCTTATATGA 1392 0.4174 MGMFSFGILSNQTLSSPTTGAFGNQGFNHHNVKEEDKSFSTFSFQTQSQPSLSSTAGFQSSTGIAQTGWSFQETDRFSGRMNMSVVKTEGSSSIQSFTPENVASAQNNYKSGLQSDNNNYHPQIQTLNKRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVEKSLEGHVTEIVYKGTHNHPKPQATRRNSLSGSSLAIPPLNHVSNEIPDATHGNGHMDSVATPDNSSISMGDDDFEQSSQKSKSGEDFDEDEPGAKRWRIEGENEGISAAGSRTVREPRVVVQTTSEIDILDDGYRWRKYGQSSKGKSKSKFGQNPIIEFLITSNASNHKCMMLTFVGILQSYYKCTNPGCPVRKHVERASNDLKAVITTYEGKHNHDVPVPRGSGCQSVNRPLPTNATNNTMSSAPVTQYTNNSVNNSLQSFRPPEGQALFTPEMLESPGGFGFQGLGIQWNLI 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi626g00013 463 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 41 416 IPR044810 GO:0003700
Sebi626g00013 463 SMART WRKY_cls 299 387 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi626g00013 463 SMART WRKY_cls 131 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi626g00013 463 SUPERFAMILY WRKY DNA-binding domain 349 388 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi626g00013 463 MobiDBLite consensus disorder prediction 182 267 - -
Sebi626g00013 463 MobiDBLite consensus disorder prediction 244 267 - -
Sebi626g00013 463 FunFam WRKY transcription factor 121 191 - -
Sebi626g00013 463 SUPERFAMILY WRKY DNA-binding domain 130 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi626g00013 463 Gene3D WRKY domain 284 389 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi626g00013 463 Gene3D WRKY domain 117 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi626g00013 463 MobiDBLite consensus disorder prediction 226 243 - -
Sebi626g00013 463 Pfam WRKY DNA -binding domain 132 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi626g00013 463 Pfam WRKY DNA -binding domain 349 385 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi626g00013 463 SUPERFAMILY WRKY DNA-binding domain 291 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi626g00013 463 ProSiteProfiles WRKY domain profile. 132 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi626g00013 463 ProSiteProfiles WRKY domain profile. 294 388 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi626g00013 463 MobiDBLite consensus disorder prediction 190 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi626g00013 Sebi-Chr626 197047 198936 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi626g00013 129 453 WRKY Transcription Factor Family AT2G38470 49.853 6.53e-89 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi626g00013 WRKY 2.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi626g00013 K13424 - gmx:100127393 550.821