Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi624g00001 ATGGATAATGGCAATACTTGTGCATTAAACGTGCAGGTGCAGGCTCTCACAATTCTAATCTTCATCCTTCTATCAATTGCTGCAGCTTGCGACGACAACAGTACTAATCATCATCCCCAAAACAGTACCACCCAAAGCTATGTAAACTACATCAAAAACGCATGTCGTTCAACCACATACCCTTCCATATGCTACAAATCTCTGTATCCCTATGCATTGAAAATTGAAGCTGATCCCCTGAAGCTCTGCAATACTTCTCTGTCTCTCGCCTTAAAGGCAGCTTATAGAGCATCCACGACGATATCAAAGCTTTTGGAGAACAACAATTTGGCACACACAACAGAACTAGTGGTTGAAGACTGCATTGACAATCTCAAGGAGTCCATTGGGGAATTGAGGGATTCTCTTGTTGCAATGCAACATTTGGATAGTGATAGAGAGTTTCAAATGAGCAACATCAAGACTTGGGTGAGTGCTGCTATCACTGATGATCAAACATGCTCTGATGGGTTTGATGGGTTTGACAATGTTATGGATGTCAATGTGAGGGATAAGATTAGAAAGAATGTTTTCAAAGTGGGAAAGATGACTAGCAATGCTTTGTATTTCATTAACAATCTCACCTACTAA 630 0.4063 MDNGNTCALNVQVQALTILIFILLSIAAACDDNSTNHHPQNSTTQSYVNYIKNACRSTTYPSICYKSLYPYALKIEADPLKLCNTSLSLALKAAYRASTTISKLLENNNLAHTTELVVEDCIDNLKESIGELRDSLVAMQHLDSDREFQMSNIKTWVSAAITDDQTCSDGFDGFDNVMDVNVRDKIRKNVFKVGKMTSNALYFINNLTY 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi624g00001 209 CDD PMEI-like_3 54 208 - -
Sebi624g00001 209 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 208 IPR035513 -
Sebi624g00001 209 SMART PMEI_2 46 203 IPR006501 GO:0004857
Sebi624g00001 209 NCBIfam pectinesterase inhibitor domain 21 208 IPR006501 GO:0004857
Sebi624g00001 209 PANTHER PECTINESTERASE INHIBITOR-LIKE 18 201 - -
Sebi624g00001 209 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 207 IPR035513 -
Sebi624g00001 209 FunFam Pectinesterase 47 208 - -
Sebi624g00001 209 Pfam Plant invertase/pectin methylesterase inhibitor 50 201 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi624g00001 Sebi-Chr624 49010 49639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi624g00001 24 208 Carbohydrate Esterase AT1G53830 28.421 2.53e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi624g00001 - - gmx:100527443 222.246