Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi623g00020 ATGGAAATCACTAGCAGCCATAATAGCAGTAGCATGATGTGGTTTTTCAAGGATAGAGGGTTTGATGATAACAGCATACAAGGAATGTTCAGAAAATGCAAGCGCCTTGAGATTGTGCATCAGGAAAGAGCAAATGAGAACTGGGAGTATTTGAGAAGCATTGGCATTCAAGAAAGGAAATTGCCCTCAATTGTTTCAAAATGCCCTAAGATTCTTGCACTGGGTCTTAATGAGAAGATTGTGCCCATGGTTGAGTGTCTCAGGACACTAGGAACAAAACCCCATGAAGTTGCTTCTGCCATAGCCAAGTTCCCTCATATACTCTCACATAGTGTGGAGGAGAAGCTCTGTCCCCTTTTGGCCTTCTTTCAGGCATTAGGCGTCCCCGAAAAGCAAATTGGGAAAATCATACTGTTAAACCCTAGGCTTATCAGTTACAGCATTGAAACAAAGATGGCAGAAATTGTAGACTTCCTTGCCACCCTTGGTCTGAAAAAAGATGGAATGATTGGAAAAGTTATAGTCAAGGATCCATTTATTATGGGTTATAGTGTTGATAAGAGGCTCCGCCCTACTTCACAGTTTCTGAAGTCAATAGGTCTGACTGAGGAGGATCTTCAAGTGGTGGCAATGAACTTCCCATCAATTTTGAGTAGAGATGTGAACAAGGTTTTGGAACCAAATTATGCTTATTTAAAGAAATGTGGATTTCAAGACAGACAGGTAGTTGATTTGGTGGTTGGTTTTCCTCCTATCCTGATCAAGAGTATCCAAAATTCTTTAGAACCGAGGATCAAGTTTTTAGTAGATGTAATGGGGAGACAAGTTGATGAAGTCATTGATTATCCTTGCTTCTTTCGTCATGGCCTGAAGAAAAGATTAGAGTTGCGGCACAAACTTCTAAAGCAGAGGAATTTAAATTGTAGCTTGAGTGAAATGCTGGACTGTAATAAGAAGAAGTTCCTCATGAAGTTTGGCTTGTTAGAAGGATGCGCCTTGAGTAACTAG 1008 0.4058 MEITSSHNSSSMMWFFKDRGFDDNSIQGMFRKCKRLEIVHQERANENWEYLRSIGIQERKLPSIVSKCPKILALGLNEKIVPMVECLRTLGTKPHEVASAIAKFPHILSHSVEEKLCPLLAFFQALGVPEKQIGKIILLNPRLISYSIETKMAEIVDFLATLGLKKDGMIGKVIVKDPFIMGYSVDKRLRPTSQFLKSIGLTEEDLQVVAMNFPSILSRDVNKVLEPNYAYLKKCGFQDRQVVDLVVGFPPILIKSIQNSLEPRIKFLVDVMGRQVDEVIDYPCFFRHGLKKRLELRHKLLKQRNLNCSLSEMLDCNKKKFLMKFGLLEGCALSN 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi623g00020 335 Pfam mTERF 13 123 IPR003690 GO:0003690|GO:0006355
Sebi623g00020 335 Pfam mTERF 106 322 IPR003690 GO:0003690|GO:0006355
Sebi623g00020 335 Gene3D Transcription termination factor 3, mitochondrial 111 328 IPR038538 -
Sebi623g00020 335 Gene3D Transcription termination factor 3, mitochondrial 1 110 IPR038538 -
Sebi623g00020 335 FunFam transcription termination factor MTERF6, chloroplastic/mitochondrial 97 329 - -
Sebi623g00020 335 SMART mt_12 276 307 IPR003690 GO:0003690|GO:0006355
Sebi623g00020 335 SMART mt_12 243 275 IPR003690 GO:0003690|GO:0006355
Sebi623g00020 335 SMART mt_12 171 202 IPR003690 GO:0003690|GO:0006355
Sebi623g00020 335 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Sebi623g00020 335 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Sebi623g00020 335 SMART mt_12 207 238 IPR003690 GO:0003690|GO:0006355
Sebi623g00020 335 SMART mt_12 62 93 IPR003690 GO:0003690|GO:0006355
Sebi623g00020 335 PANTHER CGI-12 PROTEIN-RELATED 132 252 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi623g00020 Sebi-Chr623 458373 459380 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Sebi623g00020 mTERF 5.3e-46 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi623g00020 K15031 - gmx:100816929 583.178